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一组意大利肌萎缩侧索硬化症患者的基因变异

Variants in a Cohort of Italian Patients With Amyotrophic Lateral Sclerosis.

作者信息

Riva Nilo, Pozzi Laura, Russo Tommaso, Pipitone Giovanni Battista, Schito Paride, Domi Teuta, Agosta Federica, Quattrini Angelo, Carrera Paola, Filippi Massimo

机构信息

Neuropathology Unit, Division of Neuroscience, Institute of Experimental Neurology (INSPE), San Raffaele Scientific Institute, Milan, Italy.

Neurology Unit, San Raffaele Scientific Institute, Milan, Italy.

出版信息

Front Neurosci. 2022 Apr 14;16:833051. doi: 10.3389/fnins.2022.833051. eCollection 2022.

Abstract

INTRODUCTION

In the last few years, different studies highlighted a significant enrichment of loss of function (LoF) variants in amyotrophic lateral sclerosis (ALS), and an additional role for the p.Arg261His missense variant in the disease susceptibility. Several other missense variants have been described so far, whose pathogenic relevance remains however unclear since many of them have been reported in both patients and controls. This study aimed to investigate the presence of variants and their correlation with phenotype in a cohort of Italian patients with ALS.

METHODS

We sequenced a cohort of 350 unrelated Italian patients with ALS by next-generation sequencing (NGS) and then we analyzed the clinical features of carriers.

RESULTS

We detected 20 different rare variants (four LoF and 16 missense) in 33 unrelated patients with sporadic ALS (sALS). The four LoF variants (two frameshift and two splice-site variants) were all novel. The p.Arg261His missense variant was enriched in the patients' cohort ( < 0.001). Excluding this variant from counting, the difference in the frequency of rare missense variants between patients and controls was not statistically significant. carriers had a higher frequency of flail arm (FA) phenotype compared with the other patients of the cohort (29.2% vs. 6.4%). Nine carriers (37.5%) also harbored variants in other ALS-related genes.

CONCLUSION

This study confirms that LoF and p.Arg261. His missense variants are associated with ALS in an Italian ALS cohort and suggests a correlation between the presence of variants and FA phenotype.

摘要

引言

在过去几年中,不同的研究强调了肌萎缩侧索硬化症(ALS)中功能丧失(LoF)变体的显著富集,以及p.Arg261His错义变体在疾病易感性中的额外作用。到目前为止,还描述了其他几种错义变体,然而它们的致病相关性仍不清楚,因为其中许多在患者和对照中均有报道。本研究旨在调查一组意大利ALS患者中变体的存在及其与表型的相关性。

方法

我们通过下一代测序(NGS)对一组350名无关的意大利ALS患者进行了测序,然后分析了携带者的临床特征。

结果

我们在33名散发性ALS(sALS)无关患者中检测到20种不同的罕见变体(4种LoF和16种错义变体)。这4种LoF变体(2种移码变体和2种剪接位点变体)均为新发现的。p.Arg261His错义变体在患者队列中富集(P<0.001)。将该变体排除计数后,患者与对照之间罕见错义变体频率的差异无统计学意义。携带者中连枷臂(FA)表型的频率高于队列中的其他患者(29.2%对6.4%)。9名携带者(37.5%)在其他ALS相关基因中也存在变体。

结论

本研究证实,在意大利ALS队列中,LoF和p.Arg261His错义变体与ALS相关,并提示变体的存在与FA表型之间存在相关性。

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