Lim Hocheol, Jeon Hyeon-Nae, Rhee June-Koo, Oh Byungdu, No Kyoung Tai
The Interdisciplinary Graduate Program in Integrative Biotechnology and Translational Medicine, Yonsei University, Incheon, Republic of Korea.
Bioinformatics and Molecular Design Research Center (BMDRC), Incheon, Republic of Korea.
Sci Rep. 2022 May 6;12(1):7495. doi: 10.1038/s41598-022-11537-6.
Quantum computing is expected to play an important role in solving the problem of huge computational costs in various applications by utilizing the collective properties of quantum states, including superposition, interference, and entanglement, to perform computations. Quantum mechanical (QM) methods are candidates for various applications and can provide accurate absolute energy calculations in structure-based methods. QM methods are powerful tools for describing reaction pathways and their potential energy surfaces (PES). In this study, we applied quantum computing to describe the PES of the bimolecular nucleophilic substitution (S2) reaction between chloromethane and chloride ions. We performed noiseless and noise simulations using quantum algorithms and compared the accuracy and noise effects of the ansatzes. In noiseless simulations, the results from UCCSD and k-UpCCGSD are similar to those of full configurational interaction (FCI) with the same active space, which indicates that quantum algorithms can describe the PES of the S2 reaction. In noise simulations, UCCSD is more susceptible to quantum noise than k-UpCCGSD. Therefore, k-UpCCGSD can serve as an alternative to UCCSD to reduce quantum noisy effects in the noisy intermediate-scale quantum era, and k-UpCCGSD is sufficient to describe the PES of the S2 reaction in this work. The results showed the applicability of quantum computing to the S2 reaction pathway and provided valuable information for structure-based molecular simulations with quantum computing.
量子计算有望通过利用量子态的集体特性(包括叠加、干涉和纠缠)来执行计算,从而在解决各种应用中巨大的计算成本问题方面发挥重要作用。量子力学(QM)方法适用于各种应用,并且在基于结构的方法中可以提供准确的绝对能量计算。QM方法是描述反应途径及其势能面(PES)的强大工具。在本研究中,我们应用量子计算来描述氯甲烷与氯离子之间的双分子亲核取代(S2)反应的PES。我们使用量子算法进行了无噪声和噪声模拟,并比较了不同近似方法的准确性和噪声效应。在无噪声模拟中,UCCSD和k-UpCCGSD的结果与相同活性空间下的完全组态相互作用(FCI)结果相似,这表明量子算法可以描述S2反应的PES。在噪声模拟中,UCCSD比k-UpCCGSD更容易受到量子噪声的影响。因此,在有噪声的中尺度量子时代,k-UpCCGSD可以作为UCCSD的替代方法来降低量子噪声效应,并且k-UpCCGSD足以描述本工作中S2反应的PES。结果表明了量子计算在S2反应途径中的适用性,并为基于量子计算的基于结构的分子模拟提供了有价值的信息。