State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.
University of Chinese Academy of Sciences, Beijing, 100049, China.
Small Methods. 2022 Jul;6(7):e2200130. doi: 10.1002/smtd.202200130. Epub 2022 May 8.
Mass spectrometry-based metabolomics has emerged as a powerful technique for biomedical research, although technical issues with its analytical precision and structural characterization remain. Herein, a robust non-targeted strategy for accurate quantitation and precise profiling of metabolomes is developed and applied to investigate plasma metabolic features associated with human aging. A comprehensive set of isotope-labeled standards (ISs) covering major metabolic pathways is incorporated to quantify polar metabolites. Matching rules to select ISs for calibration follow a primary criterion of minimal coefficients of variations (COVs). If minimal COVs between specific ISs for a particular metabolite fall within 5% window, a further selection of ISs is conducted based on structural similarities and proximity in retention time. The introduction and refined selection of appropriate ISs for quantitation reduces the COVs of 480 identified metabolites in quality control samples from 14.3% to 9.8% and facilitates identification of additional metabolite. Finally, the precise metabolomics approach reveals perturbations in a diverse array of metabolic pathways across aging that principally implicate steroid metabolism, amino acid metabolism, lipid metabolism, and purine metabolism, which allows the authors to draw correlates to the pathology of various age-related diseases. These findings provide clues for the prevention and treatment of these age-related diseases.
基于质谱的代谢组学已成为生物医学研究的有力技术,但在其分析精度和结构特征方面仍存在技术问题。在此,开发了一种强大的非靶向策略,用于准确定量和精确描绘代谢组,并将其应用于研究与人类衰老相关的血浆代谢特征。综合了一套涵盖主要代谢途径的同位素标记标准品 (IS) 用于定量极性代谢物。选择用于校准的 IS 的匹配规则遵循最小变异系数 (COV) 的主要标准。如果特定代谢物的特定 IS 之间的最小 COV 在 5% 窗口内,则根据结构相似性和保留时间的接近程度进一步选择 IS。引入和精炼用于定量的合适 IS 可将质控样品中 480 种鉴定代谢物的 COV 从 14.3%降低至 9.8%,并有助于鉴定更多的代谢物。最后,精确的代谢组学方法揭示了衰老过程中多种代谢途径的扰动,主要涉及类固醇代谢、氨基酸代谢、脂质代谢和嘌呤代谢,这使作者能够将这些代谢途径与各种与年龄相关疾病的病理学联系起来。这些发现为这些与年龄相关疾病的预防和治疗提供了线索。