State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
College of Marine Life Sciences, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, 266003, China.
Arch Microbiol. 2022 May 16;204(6):325. doi: 10.1007/s00203-022-02908-8.
A Gram-stain-negative, aerobic and rod-shaped bacterium, designated strain SM 2104, was isolated from a deep-sea sediment sample collected from the Southwest Indian Ocean. Strain SM 2104 grew at 10-37 °C (optimum at 25 °C), and with 1.0-9.0% (w/v, optimum with 2-4%) NaCl. It hydrolyzed starch, tween 80 and gelatin but did not reduced nitrate to nitrite. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain SM 2104 was affiliated with the genus Alteromonas, sharing the highest 16S rRNA gene sequence similarities with type strains of Alteromonas flava (97.5%) and Alteromonas facilis (97.4%) and forming a distinct clade together with the two Alteromonas species. The digital DNA-DNA hybridization and average nucleotide identity values between strain SM 2104 and type strains of Alteromonas flava and Alteromonas facilis were below 14.5%, and 71.0%, respectively. The major fatty acids of strain SM 2104 were summed feature 3 (Cω6c/Cω7c), C and summed feature 8 (Cω7c/Cω6c). The major polar lipids of strain SM 2104 were phosphatidylethanolamine and phosphatidylglycerol and the only respiratory quinone of strain SM 2104 was ubiquinone-8. The genomic DNA G + C content of strain SM 2104 was 48.0%. On the basis of the phylogenetic, phenotypic, chemotaxonomic and genomic analyses presented in this study, strain SM 2104 is considered to represent a novel species within the genus Alteromonas, for which the name Alteromonas oceansediminis sp. nov. is proposed. The type strain is SM 2104 (= CCTCC AB 2021121 = KCTC 82867).
一株革兰氏阴性、需氧、杆状细菌,被命名为 SM 2104 菌株,从西南印度洋深海沉积物样本中分离得到。SM 2104 菌株在 10-37°C 下生长(最佳温度为 25°C),并在 1.0-9.0%(w/v,最佳为 2-4%)NaCl 中生长。它能水解淀粉、吐温 80 和明胶,但不能将硝酸盐还原为亚硝酸盐。基于 16S rRNA 基因序列的系统发育分析表明,SM 2104 菌株与交替单胞菌属的成员关系最为密切,与黄交替单胞菌(97.5%)和Facilis 交替单胞菌(97.4%)的 16S rRNA 基因序列相似度最高,与这两个交替单胞菌物种一起形成一个独特的分支。SM 2104 菌株与黄交替单胞菌和 Facilis 交替单胞菌的模式菌株之间的数字 DNA-DNA 杂交和平均核苷酸同一性值分别低于 14.5%和 71.0%。SM 2104 菌株的主要脂肪酸为 Cω6c/Cω7c、C 和 Cω7c/Cω6c 的总和特征 3。SM 2104 菌株的主要极性脂为磷脂酰乙醇胺和磷脂酰甘油,唯一的呼吸醌为泛醌-8。SM 2104 菌株的基因组 DNA G+C 含量为 48.0%。基于本研究中呈现的系统发育、表型、化学分类和基因组分析,SM 2104 菌株被认为代表了交替单胞菌属中的一个新种,建议将其命名为海洋栖交替单胞菌(Alteromonas oceansediminis)。其模式菌株为 SM 2104(= CCTCC AB 2021121 = KCTC 82867)。