Pathak Anagh, Roy Dipanjan, Banerjee Arpan
National Brain Research Centre, Gurgaon, India.
Centre for Brain Science and Applications, School of Artificial Intelligence and Data Science, Indian Institute of Technology, Jodhpur, India.
Front Comput Neurosci. 2022 May 26;16:866517. doi: 10.3389/fncom.2022.866517. eCollection 2022.
Computational neuroscience has come a long way from its humble origins in the pioneering work of Hodgkin and Huxley. Contemporary computational models of the brain span multiple spatiotemporal scales, from single neuronal compartments to models of social cognition. Each spatial scale comes with its own unique set of promises and challenges. Here, we review models of large-scale neural communication facilitated by white matter tracts, also known as whole-brain models (WBMs). Whole-brain approaches employ inputs from neuroimaging data and insights from graph theory and non-linear systems theory to model brain-wide dynamics. Over the years, WBM models have shown promise in providing predictive insights into various facets of neuropathologies such as Alzheimer's disease, Schizophrenia, Epilepsy, Traumatic brain injury, while also offering mechanistic insights into large-scale cortical communication. First, we briefly trace the history of WBMs, leading up to the state-of-the-art. We discuss various methodological considerations for implementing a whole-brain modeling pipeline, such as choice of node dynamics, model fitting and appropriate parcellations. We then demonstrate the applicability of WBMs toward understanding various neuropathologies. We conclude by discussing ways of augmenting the biological and clinical validity of whole-brain models.
计算神经科学已从霍奇金和赫胥黎开创性工作中的简陋起源取得了长足进展。当代大脑计算模型跨越多个时空尺度,从单个神经元区室到社会认知模型。每个空间尺度都有其独特的一系列前景和挑战。在此,我们回顾由白质束促进的大规模神经通信模型,也称为全脑模型(WBMs)。全脑方法采用神经成像数据的输入以及图论和非线性系统理论的见解来模拟全脑动态。多年来,WBM模型已显示出有望对诸如阿尔茨海默病、精神分裂症、癫痫、创伤性脑损伤等神经病理学的各个方面提供预测性见解,同时也能对大规模皮层通信提供机制性见解。首先,我们简要追溯WBMs的历史,直至当前的技术水平。我们讨论实施全脑建模流程的各种方法学考量,例如节点动态的选择、模型拟合和适当的脑区划分。然后,我们展示WBMs在理解各种神经病理学方面的适用性。我们通过讨论增强全脑模型的生物学和临床有效性的方法来得出结论。