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RNA 结合蛋白 HuR 通过转录后调控胰腺导管腺癌中的促肿瘤激活因子 YAP1。

The RNA-Binding Protein HuR Posttranscriptionally Regulates the Protumorigenic Activator YAP1 in Pancreatic Ductal Adenocarcinoma.

机构信息

Department of Surgery, Jefferson Pancreas, Biliary and Related Cancer Center, Philadelphia, Pennsylvania, USA.

Department of Surgery, Oregon Health & Science University, Portland, Oregon, USA.

出版信息

Mol Cell Biol. 2022 Jul 21;42(7):e0001822. doi: 10.1128/mcb.00018-22. Epub 2022 Jun 15.

Abstract

Yes-associated protein 1 (YAP1) is indispensable for the development of mutant -driven pancreatic ductal adenocarcinoma (PDAC). High mRNA is a prognostic marker for worse overall survival in patient samples; however, the regulatory mechanisms that mediate its overexpression are not well understood. genetic alterations are rare in PDAC, suggesting that its dysregulation is likely not due to genetic events. HuR is an RNA-binding protein whose inhibition impacts many cancer-associated pathways, including the "conserved YAP1 signature" as demonstrated by gene set enrichment analysis. Screening publicly available and internal ribonucleoprotein immunoprecipitation (RNP-IP) RNA sequencing (RNA-Seq) data sets, we discovered that is a high-confidence target, which was validated with independent RNP-IPs and 3' untranslated region (UTR) binding assays. In accordance with our RNA sequencing analysis, transient inhibition (e.g., small interfering RNA [siRNA] and small-molecular inhibition) and CRISPR knockout of HuR significantly reduced expression of YAP1 and its transcriptional targets. We used these data to develop a HuR activity signature (HAS), in which high expression predicts significantly worse overall and disease-free survival in patient samples. Importantly, the signature strongly correlates with mRNA expression. These findings highlight a novel mechanism of YAP1 regulation, which may explain how tumor cells maintain mRNA expression at dynamic times during pancreatic tumorigenesis.

摘要

Yes 相关蛋白 1 (YAP1) 对于突变驱动的胰腺导管腺癌 (PDAC) 的发展是必不可少的。在患者样本中,高 mRNA 是总生存期较差的预后标志物;然而,介导其过表达的调节机制尚不清楚。在 PDAC 中, 基因改变很少见,这表明其失调不太可能是由于遗传事件引起的。HuR 是一种 RNA 结合蛋白,其抑制作用会影响许多与癌症相关的途径,包括“保守的 YAP1 特征”,这一点在基因集富集分析中得到了证明。我们筛选了公开可用的和内部核糖核蛋白免疫沉淀 (RNP-IP) RNA 测序 (RNA-Seq) 数据集,发现 是一个高可信度的靶标,这一点通过独立的 RNP-IP 和 3' 非翻译区 (UTR) 结合测定得到了验证。与我们的 RNA 测序分析一致,HuR 的瞬时抑制(例如,小干扰 RNA [siRNA] 和小分子抑制)和 CRISPR 敲除显著降低了 YAP1 及其转录靶标的表达。我们使用这些数据开发了 HuR 活性特征 (HAS),其中高表达预测患者样本中总生存期和无病生存期明显更差。重要的是,该特征与 mRNA 表达强烈相关。这些发现强调了 YAP1 调节的一种新机制,这可能解释了肿瘤细胞如何在胰腺肿瘤发生的动态时间内维持 mRNA 表达。

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