• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

实验热诱导转座增加拟南芥的耐旱性。

Experimentally heat-induced transposition increases drought tolerance in Arabidopsis thaliana.

机构信息

Department of Plant and Microbial Biology, University of Zurich, 8008, Zürich, Switzerland.

Department of Environmental Sciences - Botany, University of Basel, 4056, Basel, Switzerland.

出版信息

New Phytol. 2022 Oct;236(1):182-194. doi: 10.1111/nph.18322. Epub 2022 Jul 9.

DOI:10.1111/nph.18322
PMID:35715973
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9544478/
Abstract

Eukaryotic genomes contain a vast diversity of transposable elements (TEs). Formerly often described as selfish and parasitic DNA sequences, TEs are now recognised as a source of genetic diversity and powerful drivers of evolution. However, because their mobility is tightly controlled by the host, studies experimentally assessing how fast TEs may mediate the emergence of adaptive traits are scarce. We exposed Arabidopsis thaliana high-copy TE lines (hcLines) with up to c. eight-fold increased copy numbers of the heat-responsive ONSEN TE to drought as a straightforward and ecologically highly relevant selection pressure. We provide evidence for increased drought tolerance in five out of the 23 tested hcLines and further pinpoint one of the causative mutations to an exonic insertion of ONSEN in the ribose-5-phosphate-isomerase 2 gene. The resulting loss-of-function mutation caused a decreased rate of photosynthesis, plant size and water consumption. Overall, we show that the heat-induced transposition of a low-copy TE increases phenotypic diversity and leads to the emergence of drought-tolerant individuals in A. thaliana. This is one of the rare empirical examples substantiating the adaptive potential of mobilised stress-responsive TEs in eukaryotes. Our work demonstrates the potential of TE-mediated loss-of-function mutations in stress adaptation.

摘要

真核生物基因组中包含着大量的转座元件(TEs)。TEs 曾经常被描述为自私和寄生的 DNA 序列,但现在被认为是遗传多样性的来源和进化的强大驱动力。然而,由于它们的移动性受到宿主的严格控制,因此很少有实验研究评估 TEs 可能在多快的速度下介导适应性特征的出现。我们将拟南芥高拷贝 TE 系(hcLines)暴露在干旱作为一种简单且在生态学上高度相关的选择压力下,这些 hcLines 的 ONSEN TE 的拷贝数增加了约 8 倍。我们在 23 个测试的 hcLines 中有 5 个提供了耐旱性增强的证据,并进一步将一个致因突变确定为 ONSEN 在核酮糖-5-磷酸异构酶 2 基因中的外显子插入。由此产生的功能丧失突变导致光合作用、植物大小和耗水量降低。总的来说,我们表明,低拷贝 TE 的热诱导转座增加了表型多样性,并导致拟南芥中耐旱个体的出现。这是为数不多的实证例子之一,证明了可移动的应激响应 TEs 在真核生物中的适应潜力。我们的工作证明了 TE 介导的功能丧失突变在应激适应中的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/36b0f2da521e/NPH-236-182-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/b65d68e9d094/NPH-236-182-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/fee8c78b5246/NPH-236-182-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/a227eccf213a/NPH-236-182-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/07e2ea1f0da5/NPH-236-182-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/36b0f2da521e/NPH-236-182-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/b65d68e9d094/NPH-236-182-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/fee8c78b5246/NPH-236-182-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/a227eccf213a/NPH-236-182-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/07e2ea1f0da5/NPH-236-182-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027e/9544478/36b0f2da521e/NPH-236-182-g005.jpg

相似文献

1
Experimentally heat-induced transposition increases drought tolerance in Arabidopsis thaliana.实验热诱导转座增加拟南芥的耐旱性。
New Phytol. 2022 Oct;236(1):182-194. doi: 10.1111/nph.18322. Epub 2022 Jul 9.
2
Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana.转座元件有助于拟南芥的适应。
Genome Biol Evol. 2018 Aug 1;10(8):2140-2150. doi: 10.1093/gbe/evy171.
3
ONSEN shows different transposition activities in RdDM pathway mutants.温泉在 RdDM 途径突变体中表现出不同的转位活性。
Genes Genet Syst. 2020 Oct 23;95(4):183-190. doi: 10.1266/ggs.20-00019. Epub 2020 Sep 5.
4
Transposition favors the generation of large effect mutations that may facilitate rapid adaption.易位有利于产生可能促进快速适应的大效应突变。
Nat Commun. 2019 Jul 31;10(1):3421. doi: 10.1038/s41467-019-11385-5.
5
Adaptation to spring heat and drought in northeastern Spanish Arabidopsis thaliana.东北西班牙拟南芥对春旱的适应。
New Phytol. 2014 Jan;201(1):323-334. doi: 10.1111/nph.12485. Epub 2013 Oct 1.
6
Nearby transposable elements impact plant stress gene regulatory networks: a meta-analysis in A. thaliana and S. lycopersicum.邻近的可转座元件影响植物应激基因调控网络:拟南芥和番茄中的荟萃分析。
BMC Genomics. 2022 Jan 4;23(1):18. doi: 10.1186/s12864-021-08215-8.
7
A Stress-Activated Transposon in Arabidopsis Induces Transgenerational Abscisic Acid Insensitivity.拟南芥中应激激活的转座子诱导跨代脱落酸不敏感。
Sci Rep. 2016 Mar 15;6:23181. doi: 10.1038/srep23181.
8
Drought adaptation in by extensive genetic loss-of-function.通过广泛的遗传功能丧失来适应干旱。
Elife. 2018 Dec 6;7:e41038. doi: 10.7554/eLife.41038.
9
The evolution of transposable elements in natural populations of self-fertilizing Arabidopsis thaliana and its outcrossing relative Arabidopsis lyrata.自花授粉拟南芥和其异交近缘种拟南芥 lyrata 自然种群中转座元件的进化。
BMC Evol Biol. 2010 Jan 12;10:10. doi: 10.1186/1471-2148-10-10.
10
Detection of Transposable Element Insertions in Arabidopsis Using Sequence Capture.利用序列捕获技术检测拟南芥中的转座元件插入。
Methods Mol Biol. 2021;2250:141-155. doi: 10.1007/978-1-0716-1134-0_14.

引用本文的文献

1
Physiologic, Genetic and Epigenetic Determinants of Water Deficit Tolerance in Fruit Trees.果树水分亏缺耐受性的生理、遗传和表观遗传决定因素
Plants (Basel). 2025 Jun 10;14(12):1769. doi: 10.3390/plants14121769.
2
Species-wide gene editing of a flowering regulator reveals hidden phenotypic variation.对一种开花调控因子进行全物种基因编辑揭示了隐藏的表型变异。
PLoS Biol. 2025 Jun 9;23(6):e3003226. doi: 10.1371/journal.pbio.3003226. eCollection 2025 Jun.
3
The role of mobile DNA elements in the dynamics of plant genome plasticity.移动DNA元件在植物基因组可塑性动态变化中的作用。

本文引用的文献

1
Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages.从头突变导致开花时间的平行缩短,使定居谱系的进化拯救成为可能。
Nat Commun. 2022 Mar 18;13(1):1461. doi: 10.1038/s41467-022-28800-z.
2
DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development.无 DNA 甲基化的拟南芥揭示了 DNA 甲基化在调控基因表达和发育中的关键作用。
Nat Commun. 2022 Mar 14;13(1):1335. doi: 10.1038/s41467-022-28940-2.
3
The genomic ecosystem of transposable elements in maize.
J Exp Bot. 2025 Jun 17;76(9):2433-2446. doi: 10.1093/jxb/erae523.
4
Characterization of radiations-induced genomic structural variations in Arabidopsis thaliana.拟南芥中辐射诱导的基因组结构变异的特征分析
Plant J. 2025 Jan;121(1):e17180. doi: 10.1111/tpj.17180. Epub 2024 Dec 1.
5
Natural Diversity of Heat-Induced Transcription of Retrotransposons in Arabidopsis thaliana.拟南芥中反转录转座子热诱导转录的自然多样性。
Genome Biol Evol. 2024 Nov 1;16(11). doi: 10.1093/gbe/evae242.
6
The evolutionary consequences of interactions between the epigenome, the genome and the environment.表观基因组、基因组与环境之间相互作用的进化后果。
Evol Appl. 2024 Jul 23;17(7):e13730. doi: 10.1111/eva.13730. eCollection 2024 Jul.
7
Environment-induced heritable variations are common in Arabidopsis thaliana.环境诱导的可遗传变异在拟南芥中很常见。
Nat Commun. 2024 May 30;15(1):4615. doi: 10.1038/s41467-024-49024-3.
8
Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon.在 siRNA 缺陷型植物中转座 HOPPLA 表明环境对短柄草 retrotransposon 迁移的影响有限。
PLoS Genet. 2024 Mar 12;20(3):e1011200. doi: 10.1371/journal.pgen.1011200. eCollection 2024 Mar.
9
Toward Transgene-Free Transposon-Mediated Biological Mutagenesis for Plant Breeding.实现无转基因的转座子介导的生物诱变用于植物育种。
Int J Mol Sci. 2023 Dec 2;24(23):17054. doi: 10.3390/ijms242317054.
10
Plants and Small Molecules: An Up-and-Coming Synergy.植物与小分子:一种新兴的协同作用
Plants (Basel). 2023 Apr 21;12(8):1729. doi: 10.3390/plants12081729.
玉米中转座元件的基因组生态系统。
PLoS Genet. 2021 Oct 14;17(10):e1009768. doi: 10.1371/journal.pgen.1009768. eCollection 2021 Oct.
4
Genomic impact of stress-induced transposable element mobility in Arabidopsis.应激诱导的拟南芥转座元件活性的基因组影响。
Nucleic Acids Res. 2021 Oct 11;49(18):10431-10447. doi: 10.1093/nar/gkab828.
5
Genome-wide DNA mutations in Arabidopsis plants after multigenerational exposure to high temperatures.经过多代高温暴露后,拟南芥植物的全基因组 DNA 突变。
Genome Biol. 2021 May 25;22(1):160. doi: 10.1186/s13059-021-02381-4.
6
Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana.遗传和环境调控转座子的移动塑造了拟南芥的进化潜力。
Genome Biol. 2021 May 6;22(1):138. doi: 10.1186/s13059-021-02348-5.
7
Thermal stress accelerates mutation rate.热应激会加速突变率。
Genome Res. 2021 Jan;31(1):40-50. doi: 10.1101/gr.259853.119. Epub 2020 Dec 17.
8
A Field Guide to Eukaryotic Transposable Elements.真核转座元件野外手册。
Annu Rev Genet. 2020 Nov 23;54:539-561. doi: 10.1146/annurev-genet-040620-022145. Epub 2020 Sep 21.
9
ONSEN shows different transposition activities in RdDM pathway mutants.温泉在 RdDM 途径突变体中表现出不同的转位活性。
Genes Genet Syst. 2020 Oct 23;95(4):183-190. doi: 10.1266/ggs.20-00019. Epub 2020 Sep 5.
10
ilastik: interactive machine learning for (bio)image analysis.ilastik:用于(生物)图像处理的交互式机器学习。
Nat Methods. 2019 Dec;16(12):1226-1232. doi: 10.1038/s41592-019-0582-9. Epub 2019 Sep 30.