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COVID-19 相关蛋白在脊柱结核中的作用机制:免疫失调。

Mechanism of COVID-19-Related Proteins in Spinal Tuberculosis: Immune Dysregulation.

机构信息

Spine and Osteopathy Ward, Guangxi Medical University First Affiliated Hospital, Nanning, China.

Department of Hematology, Guangxi Medical University First Affiliated Hospital, Nanning, China.

出版信息

Front Immunol. 2022 Jun 2;13:882651. doi: 10.3389/fimmu.2022.882651. eCollection 2022.

Abstract

PURPOSE

The purpose of this article was to investigate the mechanism of immune dysregulation of COVID-19-related proteins in spinal tuberculosis (STB).

METHODS

Clinical data were collected to construct a nomogram model. C-index, calibration curve, ROC curve, and DCA curve were used to assess the predictive ability and accuracy of the model. Additionally, 10 intervertebral disc samples were collected for protein identification. Bioinformatics was used to analyze differentially expressed proteins (DEPs), including immune cells analysis, Gene Ontology (GO) and KEGG pathway enrichment analysis, and protein-protein interaction networks (PPI).

RESULTS

The nomogram predicted risk of STB ranging from 0.01 to 0.994. The C-index and AUC in the training set were 0.872 and 0.862, respectively. The results in the external validation set were consistent with the training set. Immune cells scores indicated that B cells naive in STB tissues were significantly lower than non-TB spinal tissues. Hub proteins were calculated by Degree, Closeness, and MCC methods. The main KEGG pathway included Coronavirus disease-COVID-19. There were 9 key proteins in the intersection of COVID-19-related proteins and hub proteins. There was a negative correlation between B cells naive and RPL19. COVID-19-related proteins were associated with immune genes.

CONCLUSION

Lymphocytes were predictive factors for the diagnosis of STB. Immune cells showed low expression in STB. Nine COVID-19-related proteins were involved in STB mechanisms. These nine key proteins may suppress the immune mechanism of STB by regulating the expression of immune genes.

摘要

目的

本文旨在研究 COVID-19 相关蛋白引起的免疫失调在脊柱结核(STB)中的作用机制。

方法

收集临床资料构建列线图模型,采用 C 指数、校准曲线、ROC 曲线、DCA 曲线评价模型的预测能力和准确性。另外收集 10 例椎间盘样本进行蛋白鉴定,采用生物信息学方法分析差异表达蛋白(DEPs),包括免疫细胞分析、GO 及 KEGG 通路富集分析、蛋白互作网络(PPI)。

结果

列线图预测 STB 风险范围为 0.01~0.994,训练集 C 指数及 AUC 分别为 0.872、0.862,外部验证集结果与训练集一致。免疫细胞评分显示 STB 组织中 B 细胞幼稚明显低于非 TB 脊柱组织。通过 Degree、Closeness、MCC 方法计算得到核心蛋白。主要 KEGG 通路包括冠状病毒病 COVID-19,COVID-19 相关蛋白与核心蛋白交集有 9 个关键蛋白,B 细胞幼稚与 RPL19 呈负相关,COVID-19 相关蛋白与免疫基因有关。

结论

淋巴细胞是 STB 诊断的预测因子,STB 中免疫细胞表达降低,9 个 COVID-19 相关蛋白参与 STB 机制,这 9 个关键蛋白可能通过调节免疫基因的表达来抑制 STB 的免疫机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8499/9202521/7a426984f04f/fimmu-13-882651-g001.jpg

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