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本文引用的文献

1
Affinity and Valence Impact the Extent and Symmetry of Phase Separation of Multivalent Proteins.多价蛋白的亲和性和价态影响相分离的程度和对称性。
Phys Rev Lett. 2022 Sep 16;129(12):128102. doi: 10.1103/PhysRevLett.129.128102.
2
Co-condensation of proteins with single- and double-stranded DNA.蛋白质与单链和双链DNA的共凝聚。
Proc Natl Acad Sci U S A. 2022 Mar 8;119(10):e2107871119. doi: 10.1073/pnas.2107871119. Epub 2022 Mar 1.
3
Compartmentalization of telomeres through DNA-scaffolded phase separation.通过 DNA 支架相分离实现端粒的隔室化。
Dev Cell. 2022 Jan 24;57(2):277-290.e9. doi: 10.1016/j.devcel.2021.12.017.
4
Current Understanding of Molecular Phase Separation in Chromosomes.染色体中分子相分离的最新认识。
Int J Mol Sci. 2021 Oct 4;22(19):10736. doi: 10.3390/ijms221910736.
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SARS-CoV-2 nucleocapsid protein forms condensates with viral genomic RNA.SARS-CoV-2 核衣壳蛋白与病毒基因组 RNA 形成凝聚物。
PLoS Biol. 2021 Oct 11;19(10):e3001425. doi: 10.1371/journal.pbio.3001425. eCollection 2021 Oct.
6
HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics.HP1α 是一种染色质交联剂,可控制核和有丝分裂染色体力学。
Elife. 2021 Jun 9;10:e63972. doi: 10.7554/eLife.63972.
7
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA.新型冠状病毒核衣壳蛋白是动态的、无规则的,并与 RNA 发生相分离。
Nat Commun. 2021 Mar 29;12(1):1936. doi: 10.1038/s41467-021-21953-3.
8
Liquid-Liquid Phase Separation of Tau Protein Is Encoded at the Monomeric Level.tau 蛋白的液-液相分离在单体水平上被编码。
J Phys Chem Lett. 2021 Mar 18;12(10):2576-2586. doi: 10.1021/acs.jpclett.1c00208. Epub 2021 Mar 9.
9
HP1 proteins compact DNA into mechanically and positionally stable phase separated domains.HP1 蛋白将 DNA 压缩成机械和位置稳定的相分离结构域。
Elife. 2021 Mar 4;10:e64563. doi: 10.7554/eLife.64563.
10
Ligand effects on phase separation of multivalent macromolecules.配体对多价大分子相分离的影响。
Proc Natl Acad Sci U S A. 2021 Mar 9;118(10). doi: 10.1073/pnas.2017184118.

端粒 DNA 环境中端粒体蛋白复合物成分对核酸的凝聚和相分离的调节作用。

Shelterin Components Modulate Nucleic Acids Condensation and Phase Separation in the Context of Telomeric DNA.

机构信息

Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, United States; Center for Science & Engineering of Living Systems, Washington University in St. Louis, St. Louis, MO 63130, United States.

Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, United States.

出版信息

J Mol Biol. 2022 Aug 30;434(16):167685. doi: 10.1016/j.jmb.2022.167685. Epub 2022 Jun 17.

DOI:10.1016/j.jmb.2022.167685
PMID:35724929
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9378516/
Abstract

Telomeres are nucleoprotein complexes that protect the ends of chromosomes and are essential for chromosome stability in Eukaryotes. In cells, individual telomeres form distinct globules of finite size that appear to be smaller than expected for bare DNA. Moreover, telomeres can cluster together, form telomere-induced-foci or co-localize with promyelocytic leukemia (PML) nuclear bodies. The physical basis for collapse of individual telomeres and coalescence of multiple ones remains unclear, as does the relationship between these two phenomena. By combining single-molecule force spectroscopy measurements, optical microscopy, turbidity assays, and simulations, we show that the telomere scaffolding protein TRF2 can condense individual DNA chains and drives coalescence of multiple DNA molecules, leading to phase separation and the formation of liquid-like droplets. Addition of the TRF2 binding protein hRap1 modulates phase boundaries and tunes the specificity of solution demixing while simultaneously altering the degree of DNA compaction. Our results suggest that the condensation of single telomeres and formation of biomolecular condensates containing multiple telomeres are two different outcomes driven by the same set of molecular interactions. Moreover, binding partners, such as other telomere components, can alter those interactions to promote single-chain DNA compaction over multiple-chain phase separation.

摘要

端粒是保护染色体末端的核蛋白复合物,是真核生物染色体稳定性所必需的。在细胞中,单个端粒形成独特的、有限大小的球状结构,其尺寸似乎比裸露 DNA 预期的要小。此外,端粒可以聚集在一起,形成端粒诱导焦点或与早幼粒细胞白血病(PML)核体共定位。单个端粒的崩溃和多个端粒的合并的物理基础仍不清楚,这两种现象之间的关系也是如此。通过结合单分子力谱测量、光学显微镜、浊度测定和模拟,我们表明端粒支架蛋白 TRF2 可以浓缩单个 DNA 链,并驱动多个 DNA 分子的合并,导致相分离和形成类似液体的液滴。TRF2 结合蛋白 hRap1 的添加可以调节相边界并调整溶液分相的特异性,同时改变 DNA 压缩的程度。我们的结果表明,单个端粒的浓缩和包含多个端粒的生物分子凝聚体的形成是由同一组分子相互作用驱动的两种不同结果。此外,结合伴侣,如其他端粒成分,可以改变这些相互作用,以促进单链 DNA 压缩而不是多链相分离。

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