Huang Zhaohong, Zhang Xiangchen, Song Yehua, Cai Guorong
Computer Engineering College, Jimei University, Xiamen 361021, China.
The Second Affiliated Hospital of Xiamen Medical College, Xiamen 361021, China.
Brain Sci. 2022 Jun 11;12(6):765. doi: 10.3390/brainsci12060765.
In recent years, the increasing incidence of morbidity of brain stroke has made fast and accurate segmentation of lesion areas from brain MRI images important. With the development of deep learning, segmentation methods based on the computer have become a solution to assist clinicians in early diagnosis and treatment planning. Nevertheless, the variety of lesion sizes in brain MRI images and the roughness of the boundary of the lesion pose challenges to the accuracy of the segmentation algorithm. Current mainstream medical segmentation models are not able to solve these challenges due to their insufficient use of image features and context information. This paper proposes a novel feature enhancement and context capture network (FECC-Net), which is mainly composed of an atrous spatial pyramid pooling (ASPP) module and an enhanced encoder. In particular, the ASPP model uses parallel convolution operations with different sampling rates to enrich multi-scale features and fully capture image context information in order to process lesions of different sizes. The enhanced encoder obtains deep semantic features and shallow boundary features in the feature extraction process to achieve image feature enhancement, which is helpful for restoration of the lesion boundaries. We divide the pathological image into three levels according to the number of pixels in the real mask area and evaluate FECC-Net on an open dataset called Anatomical Tracings of Lesions After Stroke (ATLAS). The experimental results show that our FECC-Net outperforms mainstream methods, such as DoubleU-Net and TransUNet. Especially in small target tasks, FECC-Net is 4.09% ahead of DoubleU-Net on the main indicator DSC. Therefore, FECC-Net is encouraging and can be relied upon for brain MRI image applications.
近年来,脑卒中发病率的不断上升使得从脑部磁共振成像(MRI)图像中快速准确地分割病变区域变得至关重要。随着深度学习的发展,基于计算机的分割方法已成为协助临床医生进行早期诊断和治疗规划的一种解决方案。然而,脑部MRI图像中病变大小的多样性以及病变边界的粗糙性对分割算法的准确性提出了挑战。由于当前主流医学分割模型对图像特征和上下文信息的利用不足,无法解决这些挑战。本文提出了一种新颖的特征增强与上下文捕捉网络(FECC-Net),它主要由空洞空间金字塔池化(ASPP)模块和增强编码器组成。具体而言,ASPP模型使用具有不同采样率的并行卷积操作来丰富多尺度特征并充分捕捉图像上下文信息,以便处理不同大小的病变。增强编码器在特征提取过程中获得深度语义特征和浅层边界特征,以实现图像特征增强,这有助于恢复病变边界。我们根据真实掩码区域中的像素数量将病理图像分为三个级别,并在一个名为“脑卒中后病变解剖追踪(ATLAS)”的开放数据集上对FECC-Net进行评估。实验结果表明,我们的FECC-Net优于主流方法,如DoubleU-Net和TransUNet。特别是在小目标任务中,FECC-Net在主要指标DSC上比DoubleU-Net领先4.09%。因此,FECC-Net令人鼓舞,可用于脑部MRI图像应用。