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1924年麦克·邓诺(蜉蝣目:蜉蝣科)首个完整线粒体基因组及其系统发育

The first complete mitochondrial genome of Mc Dunnough, 1924 (Ephemeroptera: Ephemeridae) and its phylogeny.

作者信息

Tong Yao, Wu Lian, Lin Yi-Jie, Ayivi Sam Pedro Galilee, Storey Kenneth B, Zhang Jia-Yong, Yu Dan-Na

机构信息

College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, Zhejiang Province, China.

Department of Biology, Carleton University, Ottawa, Canada.

出版信息

Mitochondrial DNA B Resour. 2022 Jun 20;7(6):1093-1095. doi: 10.1080/23802359.2022.2086498. eCollection 2022.

DOI:10.1080/23802359.2022.2086498
PMID:35756439
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9225702/
Abstract

The phylogenetic relationship of Ephemeridae (Insect: Ephemeroptera) remains hotly debated using mitochondrial (mt) genomes. All previously reported mt genomes of Ephemeridae belong to the genus . This study provides the first complete mt genome sequence from the genus with an analysis of the mitogenome of Mc Dunnough, 1924 (Ephemeroptera: Ephemeridae) and providing new information to discuss the phylogenetic relationships within Ephemeroptera. The complete mt genome of was a circular molecule of 16,159 bp in length, containing 37 genes (2 rRNA genes, 13 protein-coding genes, 22 tRNA genes), which showed the typical mt gene arrangement of insects. The AT content of the whole genome was 70.0% and the length of the control region was 1091 bp. All protein-coding genes used ATN as the start codon, and most PCGs used TAA/TAG as the stop codons excluding COI, COII, ND5 and Cyt b that used T as the stop codon. BI and ML phylogenetic trees constructed from 27 species of 13 families showed that Ephemeridae is a sister clade to the clade Polymitarcyidae.

摘要

利用线粒体(mt)基因组对蜉蝣科(昆虫纲:蜉蝣目)的系统发育关系仍存在激烈争论。此前报道的所有蜉蝣科线粒体基因组均属于 属。本研究提供了 属的首个完整线粒体基因组序列,对 1924 年麦克多诺的 (蜉蝣目:蜉蝣科)的线粒体基因组进行了分析,并为讨论蜉蝣目内部的系统发育关系提供了新信息。 的完整线粒体基因组是一个长度为 16,159 bp 的环状分子,包含 37 个基因(2 个 rRNA 基因、13 个蛋白质编码基因、22 个 tRNA 基因),呈现出昆虫典型的线粒体基因排列。全基因组的 AT 含量为 70.0%,控制区长度为 1091 bp。所有蛋白质编码基因均以 ATN 作为起始密码子,除了 COI、COII、ND5 和 Cyt b 以 T 作为终止密码子外,大多数蛋白质编码基因以 TAA/TAG 作为终止密码子。由 13 个科的 27 个物种构建的贝叶斯(BI)和最大似然(ML)系统发育树表明,蜉蝣科是多节蜉科分支的姐妹分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21ff/9225702/66caf89c3bfd/TMDN_A_2086498_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21ff/9225702/66caf89c3bfd/TMDN_A_2086498_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21ff/9225702/66caf89c3bfd/TMDN_A_2086498_F0001_C.jpg

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