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群落多样性决定了人工选择下合成细菌群落的进化。

Community diversity determines the evolution of synthetic bacterial communities under artificial selection.

机构信息

Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, F-21000, France.

出版信息

Evolution. 2022 Aug;76(8):1883-1895. doi: 10.1111/evo.14558. Epub 2022 Jul 19.

Abstract

Artificial selection can be conducted at the community level in the laboratory through a differential propagation of the communities according to their level of expression of a targeted function. Working with communities instead of individuals as selection units brings in additional sources of variation in the considered function that can influence the outcome of the artificial selection. In this study, we wanted to assess the effect of manipulating the initial community richness on artificial selection efficiency, defined as the change in the targeted function over time. We applied artificial selection for a high productivity on synthetic bacterial communities varying for their richness (from one to 16 strains). Overall, the selected communities were 16% more productive than the control communities, but a convergence of community composition might have limited the effect of diversity on artificial selection efficiency. Community richness positively influenced community productivity and metabolic capacities and was a strong determinant of the dynamics of community evolution. We propose that applying artificial selection on communities varying for their diversity could be a way to find communities differing for their level of expression of a function but also for their responsiveness to artificial selection, provided that their initial composition is different enough.

摘要

人工选择可以在实验室的群落水平上进行,通过根据目标功能的表达水平对群落进行差异传播。以群落而不是个体作为选择单元,可以在考虑的功能中引入额外的变异来源,从而影响人工选择的结果。在这项研究中,我们想评估操纵初始群落丰富度对人工选择效率的影响,人工选择效率定义为目标功能随时间的变化。我们对合成细菌群落进行了高生产力的人工选择,这些群落的丰富度不同(从 1 到 16 株)。总的来说,选择的群落比对照群落的生产力高 16%,但群落组成的趋同可能限制了多样性对人工选择效率的影响。群落丰富度对群落生产力和代谢能力有积极影响,是群落进化动态的重要决定因素。我们提出,对多样性不同的群落进行人工选择可能是一种找到在功能表达水平上不同的群落的方法,但也可以找到对人工选择有反应的群落,前提是它们的初始组成足够不同。

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