Lee Juhee, Shou Wenying, Park Hye Jin
Department of Physics, Inha University, Incheon, Republic of Korea.
Asia Pacific Center for Theoretical Physics, Pohang, Republic of Korea.
Elife. 2025 Sep 15;13:RP97461. doi: 10.7554/eLife.97461.
Microbial collectives can perform functions beyond the capability of individual members. Enhancing collective functions through artificial selection is, however, challenging. Here, we explore the 'rafting-a-waterfall' metaphor where achieving a target population composition depends on both target and initial compositions. Specifically, collectives comprising fast-growing (F) and slow-growing (S) individuals were grown for 'maturation' time, and the collective with S-frequency closest to the target value is chosen to 'reproduce' via inoculating offspring collectives. During collective maturation, intra-collective selection acts like a waterfall, relentlessly driving the S-frequency to lower values, while during collective reproduction, inter-collective selection resembles a rafter striving to reach the target frequency. Using simulations and analytical calculations, we show that intermediate target S frequencies are the most challenging, akin to a target within the vertical drop of a waterfall, rather than above or below it. This arises because intra-collective selection is the strongest at intermediate S-frequencies, which can overpower inter-collective selection. While achieving a low target S frequencies is consistently feasible, attaining high target S-frequencies requires an initially high S-frequency - much like a raft that can descend but not ascend a waterfall. As Newborn size increases, the region of achievable target frequency is reduced until no frequency is achievable. In contrast, the number of collectives under selection plays a less critical role. In scenarios involving more than two populations, the evolutionary trajectory must navigate entirely away from the metaphorical 'waterfall drop.' Our findings illustrate that the strength of intra-collective evolution is frequency-dependent, with implications in experimental planning.
微生物群体能够执行超出个体成员能力的功能。然而,通过人工选择来增强群体功能具有挑战性。在这里,我们探讨“漂流 - 瀑布”隐喻,即实现目标群体组成既取决于目标组成也取决于初始组成。具体而言,将由快速生长(F)和缓慢生长(S)个体组成的群体培养一段“成熟”时间,然后选择S频率最接近目标值的群体通过接种后代群体来“繁殖”。在群体成熟过程中,群体内部选择就像瀑布一样,无情地将S频率推向更低的值,而在群体繁殖过程中,群体间选择类似于努力达到目标频率的筏子。通过模拟和分析计算,我们表明中等目标S频率是最具挑战性的,类似于瀑布垂直落差范围内的目标,而不是在其上方或下方。这是因为群体内部选择在中等S频率时最强,它可能会压倒群体间选择。虽然始终可以实现低目标S频率,但要实现高目标S频率则需要初始时具有高S频率——就像一个只能顺瀑布而下而不能逆流而上的筏子。随着新生群体规模的增加,可实现目标频率的区域会缩小,直到无法实现任何频率。相比之下,被选择的群体数量所起的作用较小。在涉及两个以上群体的情况下,进化轨迹必须完全避开隐喻的“瀑布落差”。我们的研究结果表明,群体内部进化的强度取决于频率,这对实验规划具有启示意义。