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通过一种即用型、热稳定多重聚合酶链反应检测法对马来西亚吉兰丹州朝觐者呼吸道感染相关目标细菌进行诊断检测。

Diagnostic detection of intended bacteria associated with respiratory tract infections among Kelantanese Malaysian Hajj pilgrims by a ready-to-use, thermostable multiplex PCR assay.

作者信息

Noor Nik Zuraina Nik Mohd, Hasan Habsah, Mohamad Suharni, Suraiya Siti

机构信息

Department of Medical Microbiology and Parasitology, School of Medical Sciences, Universiti Sains Malaysia, Kota Bharu 16150, Kelantan, Malaysia.

School of Dental Sciences, Universiti Sains Malaysia, Kota Bharu 16150, Kelantan, Malaysia.

出版信息

Saudi J Biol Sci. 2022 Aug;29(8):103349. doi: 10.1016/j.sjbs.2022.103349. Epub 2022 Jun 16.

Abstract

Bacterial respiratory tract infections (RTIs) are prone to be associated with serious health problems during the annual Hajj pilgrimage and are a public health concern due to the potential of pathogens transmission across continents. This study aimed to perform a diagnostic screening of intended bacteria associated with RTIs among Malaysian Hajj pilgrims by using a newly developed PCR assay. Expectorated sputum specimens ( = 202) and sociodemographic characteristics of the returning Hajj pilgrims were collected upon arrival in Kelantan, Malaysia. Diagnostic screening of bacterial respiratory pathogens was performed using a thermostabilized multiplex PCR assay in parallel with the sputum culture. Of the six intended bacteria: and the sputum specimens were found positive for ( = 139), ( = 20), and ( = 19) by the multiplex PCR assay. The sensitivity, specificity, positive- and negative predictive values (PPV and NPV) of this assay were 100% (95% confidence interval (CI): 97.85% to 100.00%), 92.23% (95% CI: 85.27% to 96.59%), 95.51% (95% CI: 91.61% to 97.64%) and 100.00%, respectively. The accuracy of this assay was 97.07% (95% CI: 94.31% to 98.73%). Overall, was found to be the predominant organism in the pilgrims' sputa by both molecular and microbial culture methods. The multiplex PCR assay would enable a simple, faster and reliable means for the massive screening of intended bacteria compared to the sputum culture, especially during the Hajj pilgrimage.

摘要

细菌性呼吸道感染(RTIs)在每年的朝觐朝圣期间容易引发严重的健康问题,并且由于病原体有跨大洲传播的可能性,所以成为一个公共卫生问题。本研究旨在通过使用一种新开发的聚合酶链反应(PCR)检测法,对马来西亚朝觐朝圣者中与RTIs相关的目标细菌进行诊断性筛查。在抵达马来西亚吉兰丹后,收集了归国朝觐朝圣者的咳出痰标本(n = 202)及其社会人口学特征。使用热稳定多重PCR检测法并结合痰培养,对细菌性呼吸道病原体进行诊断性筛查。在六种目标细菌中,多重PCR检测法发现痰标本中肺炎链球菌(n = 139)、金黄色葡萄球菌(n = 20)和卡他莫拉菌(n = 19)呈阳性。该检测法的灵敏度、特异性、阳性预测值和阴性预测值分别为100%(95%置信区间(CI):97.85%至100.00%)、92.23%(95%CI:85.27%至96.59%)、95.51%(95%CI:91.61%至97.64%)和100.00%。该检测法的准确率为97.07%(95%CI:94.31%至98.73%)。总体而言,通过分子和微生物培养方法均发现肺炎链球菌是朝圣者痰液中的主要病原体。与痰培养相比,多重PCR检测法将为大规模筛查目标细菌提供一种简单、快速且可靠的方法,尤其是在朝觐朝圣期间。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2baa/9253910/238254c3999d/gr1.jpg

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