College of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China.
College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen 518118, China.
Math Biosci Eng. 2022 May 25;19(8):7826-7855. doi: 10.3934/mbe.2022366.
Computed tomography (CT) has been the most effective modality for characterizing and quantifying chronic obstructive pulmonary disease (COPD). Radiomics features extracted from the region of interest in chest CT images have been widely used for lung diseases, but they have not yet been extensively investigated for COPD. Therefore, it is necessary to understand COPD from the lung radiomics features and apply them for COPD diagnostic applications, such as COPD stage classification. Lung radiomics features are used for characterizing and classifying the COPD stage in this paper. First, 19 lung radiomics features are selected from 1316 lung radiomics features per subject by using Lasso. Second, the best performance classifier (multi-layer perceptron classifier, MLP classifier) is determined. Third, two lung radiomics combination features, Radiomics-FIRST and Radiomics-ALL, are constructed based on 19 selected lung radiomics features by using the proposed lung radiomics combination strategy for characterizing the COPD stage. Lastly, the 19 selected lung radiomics features with Radiomics-FIRST/Radiomics-ALL are used to classify the COPD stage based on the best performance classifier. The results show that the classification ability of lung radiomics features based on machine learning (ML) methods is better than that of the chest high-resolution CT (HRCT) images based on classic convolutional neural networks (CNNs). In addition, the classifier performance of the 19 lung radiomics features selected by Lasso is better than that of the 1316 lung radiomics features. The accuracy, precision, recall, F1-score and AUC of the MLP classifier with the 19 selected lung radiomics features and Radiomics-ALL were 0.83, 0.83, 0.83, 0.82 and 0.95, respectively. It is concluded that, for the chest HRCT images, compared to the classic CNN, the ML methods based on lung radiomics features are more suitable and interpretable for COPD classification. In addition, the proposed lung radiomics combination strategy for characterizing the COPD stage effectively improves the classifier performance by 12% overall (accuracy: 3%, precision: 3%, recall: 3%, F1-score: 2% and AUC: 1%).
计算机断层扫描(CT)一直是用于描述和量化慢性阻塞性肺疾病(COPD)的最有效方法。从胸部 CT 图像感兴趣区域提取的放射组学特征已广泛用于肺部疾病,但尚未广泛应用于 COPD。因此,有必要从肺部放射组学特征来了解 COPD,并将其应用于 COPD 诊断应用,如 COPD 分期分类。本文利用肺部放射组学特征来描述和分类 COPD 分期。首先,通过使用 Lasso 从每位受试者的 1316 个肺部放射组学特征中选择 19 个肺部放射组学特征。其次,确定最佳性能分类器(多层感知机分类器,MLP 分类器)。第三,基于所提出的肺部放射组学组合策略,构建基于 19 个选择的肺部放射组学特征的两个肺部放射组学组合特征 Radiomics-FIRST 和 Radiomics-ALL,用于描述 COPD 分期。最后,基于最佳性能分类器,使用 19 个选择的肺部放射组学特征与 Radiomics-FIRST/Radiomics-ALL 对 COPD 分期进行分类。结果表明,基于机器学习(ML)方法的肺部放射组学特征的分类能力优于基于经典卷积神经网络(CNN)的胸部高分辨率 CT(HRCT)图像。此外,Lasso 选择的 19 个肺部放射组学特征的分类器性能优于 1316 个肺部放射组学特征。基于 19 个选择的肺部放射组学特征和 Radiomics-ALL 的 MLP 分类器的准确性、精度、召回率、F1 分数和 AUC 分别为 0.83、0.83、0.83、0.82 和 0.95。综上所述,对于胸部 HRCT 图像,与经典 CNN 相比,基于肺部放射组学特征的 ML 方法更适合和可解释 COPD 分类。此外,所提出的用于描述 COPD 分期的肺部放射组学组合策略通过整体提高分类器性能 12%(准确性:3%,精度:3%,召回率:3%,F1 分数:2%,AUC:1%)。