Wellcome Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
Trends Parasitol. 2022 Oct;38(10):831-840. doi: 10.1016/j.pt.2022.06.002. Epub 2022 Jul 6.
Rapid advancement in high-throughput sequencing and analytical approaches has seen a steady increase in the generation of genomic resources for helminth parasites. Now, helminth genomes and their annotations are a cornerstone of numerous efforts to compare genetic and transcriptomic variation, from single cells to populations of globally distributed parasites, to genome modifications to understand gene function. Our understanding of helminths is increasingly reliant on these genomic resources, which are primarily static once published and vary widely in quality and completeness between species. This article seeks to highlight the cause and effect of this variation and argues for the continued improvement of these genomic resources - even after their publication - which is necessary to provide a more accurate and complete understanding of the biology of these important pathogens.
高通量测序和分析方法的快速发展,使得寄生虫的基因组资源不断增加。现在,寄生虫的基因组及其注释是许多努力的基础,这些努力旨在比较从单细胞到全球分布的寄生虫种群的遗传和转录组变异、基因组修饰以了解基因功能。我们对寄生虫的认识越来越依赖于这些基因组资源,这些资源一旦发表就主要是静态的,并且在物种之间的质量和完整性方面差异很大。本文旨在强调这种变异的因果关系,并主张即使在基因组资源发表后,也需要继续改进这些资源,以提供对这些重要病原体生物学的更准确和完整的理解。