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用于预测需要再次入住重症监护病房的脓毒症患者院内死亡率的可解释机器学习模型

Explainable Machine-Learning Model for Prediction of In-Hospital Mortality in Septic Patients Requiring Intensive Care Unit Readmission.

作者信息

Hu Chang, Li Lu, Li Yiming, Wang Fengyun, Hu Bo, Peng Zhiyong

机构信息

Department of Critical Care Medicine, Zhongnan Hospital of Wuhan University, Wuhan, 430071, Hubei, China.

Clinical Research Center of Hubei Critical Care Medicine, Wuhan, Hubei, China.

出版信息

Infect Dis Ther. 2022 Aug;11(4):1695-1713. doi: 10.1007/s40121-022-00671-3. Epub 2022 Jul 14.

Abstract

INTRODUCTION

Septic patients requiring intensive care unit (ICU) readmission are at high risk of mortality, but research focusing on the association of ICU readmission due to sepsis and mortality is limited. The aim of this study was to develop and validate a machine learning (ML) model for predicting in-hospital mortality in septic patients readmitted to the ICU using routinely available clinical data.

METHODS

The data used in this study were obtained from the Medical Information Mart for Intensive Care (MIMIC-IV, v1.0) database, between 2008 and 2019. The study cohort included patients with sepsis requiring ICU readmission. The data were randomly split into a training (75%) data set and a validation (25%) data set. Nine popular ML models were developed to predict mortality in septic patients readmitted to the ICU. The model with the best accuracy and area under the curve (A.C.) in the validation cohort was defined as the optimal model and was selected for further prediction studies. The SHAPELY Additive explanations (SHAP) values and Local Interpretable Model-Agnostic Explanation (LIME) methods were used to improve the interpretability of the optimal model.

RESULTS

A total of 1117 septic patients who had required ICU readmission during the study period were enrolled in the study. Of these participants, 434 (38.9%) were female, and the median (interquartile range [IQR]) age was 68.6 (58.4-79.2) years. The median (IQR) ICU interval duration was 2.60 (0.64-5.78) days. After feature selection, 31 of 47 clinical factors were ultimately chosen for use in model construction. Of the nine ML models tested, the best performance was achieved with the random forest (RF) model, with an A.C. of 0.81, an accuracy of 85% and a precision of 62% in the validation cohort. The SHAP summary analysis revealed that Glasgow Coma Scale score, urine output, blood urea nitrogen, lactate, platelet count and systolic blood pressure were the top six most important factors contributing to the RF model. Additionally, the LIME method demonstrated how the RF model works in terms of explaining risk of death prediction in septic patients requiring ICU readmission.

CONCLUSION

The ML models reported here showed a good prognostic prediction ability in septic patients requiring ICU readmission. Of the features selected, the parameters related to organ perfusion made the largest contribution to outcome prediction during ICU readmission in septic patients.

摘要

引言

需要再次入住重症监护病房(ICU)的脓毒症患者死亡风险很高,但针对因脓毒症再次入住ICU与死亡率之间关联的研究有限。本研究的目的是开发并验证一种机器学习(ML)模型,该模型使用常规可用的临床数据来预测再次入住ICU的脓毒症患者的院内死亡率。

方法

本研究使用的数据来自重症监护医学信息集市(MIMIC-IV,v1.0)数据库,时间跨度为2008年至2019年。研究队列包括需要再次入住ICU的脓毒症患者。数据被随机分为训练(75%)数据集和验证(25%)数据集。开发了九种常用的ML模型来预测再次入住ICU的脓毒症患者的死亡率。在验证队列中具有最佳准确性和曲线下面积(AUC)的模型被定义为最佳模型,并被选用于进一步的预测研究。使用SHAPELY加性解释(SHAP)值和局部可解释模型无关解释(LIME)方法来提高最佳模型的可解释性。

结果

共有1117名在研究期间需要再次入住ICU的脓毒症患者纳入本研究。在这些参与者中,434名(38.9%)为女性,年龄中位数(四分位间距[IQR])为68.6(58.4 - 79.2)岁。ICU间隔时间的中位数(IQR)为2.60(0.64 - 5.78)天。经过特征选择后,最终从47个临床因素中选取了31个用于模型构建。在测试的九种ML模型中,随机森林(RF)模型表现最佳,在验证队列中的AUC为0.81,准确率为85%,精确率为62%。SHAP汇总分析显示,格拉斯哥昏迷量表评分、尿量、血尿素氮、乳酸、血小板计数和收缩压是对RF模型贡献最大的六个最重要因素。此外,LIME方法展示了RF模型在解释需要再次入住ICU的脓毒症患者死亡预测风险方面的工作原理。

结论

本文报道的ML模型在需要再次入住ICU的脓毒症患者中显示出良好的预后预测能力。在所选特征中,与器官灌注相关的参数对脓毒症患者再次入住ICU期间的结局预测贡献最大。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/9334510/15a5aa9b58ef/40121_2022_671_Fig1_HTML.jpg

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