Ma Wei, Liao Yiqun, Gao Ziwen, Zhu Wenyan, Liu Jianbing, She Wandong
Department of Otolaryngology-Head and Neck Surgery, Nanjing Drum Tower Hospital Clinical College, Nanjing Medical University, Nanjing, China.
Department of Otolaryngology-Head and Neck Surgery, Clinical Medical College, Yangzhou University, Yangzhou, China.
Clin Med Insights Oncol. 2022 Jul 8;16:11795549221109493. doi: 10.1177/11795549221109493. eCollection 2022.
encodes LIM domain and actin binding 1, a cytoskeleton-associated protein whose loss has been linked to migration and invasion behavior of cancer cells. However, the roles of LIMA1 underlying the malignant behavior of tumors in head and neck squamous cell carcinoma (HNSC) are not fully understood.
We conducted a multi-omics study on the role of LIMA1 in HNSC based on The Cancer Genome Atlas data. Subsequent in vitro experiments were performed to validate the results of bioinformatic analysis. We first identified the correlation between and tumor cell functional states according to single-cell sequencing data in HNSC. The potential downstream effects of LIMA1 were explored for gene ontology and Kyoto Encyclopedia of Genes and Genomes pathways through functional enrichment analysis of the gene sets that correlated with in HNSC. The prognostic role of LIMA1 was assessed using the log rank test to compare difference in survival between LIMA1 and LIMA1 patients. Univariate Cox regression and multivariate Cox regression were further carried out to identify the prognostic value of LIMA1 in HNSC.
LIMA1 was identified as a prognostic biomarker and is associated with epithelial-mesenchymal transition (EMT) progress in HNSC. In vitro silencing of suppressed EMT and related pathways in HNSC.
LIMA1 promotes EMT and further leads to tumor invasion and metastasis. Increased expression of indicates poor survival, identifying it as a prognostic biomarker in HNSC.
编码LIM结构域和肌动蛋白结合蛋白1,一种细胞骨架相关蛋白,其缺失与癌细胞的迁移和侵袭行为有关。然而,LIMA1在头颈部鳞状细胞癌(HNSC)肿瘤恶性行为中的作用尚未完全明确。
我们基于癌症基因组图谱数据对LIMA1在HNSC中的作用进行了多组学研究。随后进行了体外实验以验证生物信息学分析结果。我们首先根据HNSC中的单细胞测序数据确定了[未提及的某个因素]与肿瘤细胞功能状态之间的相关性。通过对与HNSC中[未提及的某个因素]相关的基因集进行功能富集分析,探索了LIMA1潜在的下游效应的基因本体论和京都基因与基因组百科全书通路。使用对数秩检验评估LIMA1的预后作用,以比较LIMA1高表达和低表达患者之间的生存差异。进一步进行单因素Cox回归和多因素Cox回归以确定LIMA1在HNSC中的预后价值。
LIMA1被确定为一种预后生物标志物,并且与HNSC中的上皮-间质转化(EMT)进程相关。体外沉默[未提及的某个因素]可抑制HNSC中的EMT及相关通路。
LIMA1促进EMT,进而导致肿瘤侵袭和转移。[未提及的某个因素]表达增加表明生存率低,将其确定为HNSC中的一种预后生物标志物。
需注意,原文中存在一些未明确表述的地方(如“BACKGROUND: encodes LIM domain and actin binding 1”中未明确指出谁编码;“METHODS”部分多处出现未明确的指代如“[未提及的某个因素]”等),翻译时尽量按照原文逻辑进行了处理。