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茄科植物化学成分作为 SARS-CoV-2 3C 样蛋白酶抑制剂的计算机模拟分析。

Solanaceae Family Phytochemicals as Inhibitors of 3C-Like Protease of SARS-CoV-2: An In Silico Analysis.

机构信息

Department of Chemistry, Bangladesh University of Engineering & Technology, Dhaka 1000, Bangladesh.

Department of Biotechnology & Genetic Engineering, University of Development Alternative, Dhaka 1207, Bangladesh.

出版信息

Molecules. 2022 Jul 25;27(15):4739. doi: 10.3390/molecules27154739.

Abstract

COVID-19, caused by the coronavirus SARS-CoV-2, emerged in late December 2019 in Wuhan, China. As of 8 April 2022, the virus has caused a global pandemic, resulting in 494,587,638 infections leading to 6,170,283 deaths around the world. Although several vaccines have received emergency authorization from USA and UK drug authorities and two more in Russia and China, it is too early to comment on the prolonged effectiveness of the vaccines, their availability, and affordability for the developing countries of the world, and the daunting task to vaccinate 7 billion people of the world with two doses of the vaccine with additional booster doses. As a result, it is still worthwhile to search for drugs and several promising leads have been found, mainly through in silico studies. In this study, we have examined the binding energies of several alkaloids and anthocyanin derivatives from the Solanaceae family, a family which contains common consumable vegetables and fruit items such as eggplant, pepper, and tomatoes. Our study demonstrates that Solanaceae family alkaloids such as incanumine and solaradixine, as well as anthocyanins and anthocyanidins, have very high predicted binding energies for the 3C-like protease of SARS-CoV-2 (also known as Mpro). Since Mpro is vital for SARS-CoV-2 replication, the compounds merit potential for further antiviral research towards the objective of obtaining affordable drugs.

摘要

COVID-19,由冠状病毒 SARS-CoV-2 引起,于 2019 年 12 月在中国武汉出现。截至 2022 年 4 月 8 日,该病毒已在全球范围内引发大流行,导致全球感染 49458.7638 亿例,死亡 617.0283 万例。尽管几种疫苗已获得美国和英国药品监管机构的紧急授权,俄罗斯和中国又有两种疫苗获得授权,但现在就评估疫苗的长期有效性、其在发展中国家的供应和可负担性,以及为全球 70 亿人接种两剂疫苗并追加加强针的艰巨任务,还为时过早。因此,寻找药物仍然是值得的,已经发现了几种有前途的线索,主要是通过计算机模拟研究。在这项研究中,我们检查了茄科植物(含有茄子、胡椒和西红柿等常见食用蔬菜和水果)中几种生物碱和花色苷衍生物的结合能。我们的研究表明,茄科植物的生物碱,如可卡因和索拉迪辛,以及花色苷和花色苷元,对 SARS-CoV-2 的 3C 样蛋白酶(也称为 Mpro)具有非常高的预测结合能。由于 Mpro 对 SARS-CoV-2 的复制至关重要,这些化合物有潜力进一步进行抗病毒研究,以获得负担得起的药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/296f/9331421/58756449d0f5/molecules-27-04739-g001a.jpg

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