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新月菱形藻豚亚种,新亚种,从帕迈拉环礁的鹿角珊瑚 Acropora cytherea 中分离出来,以及豚形菱形藻亚种的创建和修正描述。

Vibrio tetraodonis subsp. pristinus subsp. nov., isolated from the coral Acropora cytherea at Palmyra Atoll, and creation and emended description of Vibrio tetraodonis subsp. tetraodonis subsp. nov.

机构信息

Department of Biology, Southern Oregon University, Ashland, OR, USA.

Microbiology Graduate Program, University of Delaware, Newark, DE, USA.

出版信息

Antonie Van Leeuwenhoek. 2022 Sep;115(9):1215-1228. doi: 10.1007/s10482-022-01766-0. Epub 2022 Aug 3.

Abstract

Strain OCN044 was isolated from the homogenised tissue and mucus of an apparently healthy Acropora cytherea coral fragment collected from the western reef terrace of Palmyra Atoll in the Northern Line Islands and was taxonomically evaluated with a polyphasic approach. The morphological and chemotaxonomic properties are consistent with characteristics of the genus Vibrio: Gram-stain-negative rods, oxidase- and catalase-positive, and motile by means of a polar flagellum. Strain OCN044 can be differentiated as a novel subspecies based on 21 differences among chemotaxonomic features (e.g., fatty acids percentages for C and C ω7c), enzymatic activities (e.g., DNase and cystine arylamidase), and carbon sources utilized (e.g., L-xylose and D-melezitose) from its nearest genetic relative. Phylogenetic analysis and genomic comparisons show close evolutionary relatedness to Vibrio tetraodonis A511 but the overall genomic relatedness indices identify strain OCN044 as a distinct subspecies. Based on a polyphasic characterisation, differences in genomic and taxonomic data, strain OCN044 represents a novel subspecies of V. tetraodonis A511, for which the name Vibrio tetraodonis subsp. pristinus subsp. nov. is proposed. The type strain is OCN044 (= LMG 31895 = DSM 111778).

摘要

OCN044 菌株是从 Palmyra 环礁西部礁台采集的健康 Acropora cytherea 珊瑚碎片的匀浆组织和黏液中分离出来的,采用多相分类法进行了分类学评估。形态学和化学生态分类特征与弧菌属的特征一致:革兰氏阴性杆菌,氧化酶和过氧化氢酶阳性,通过极生鞭毛运动。OCN044 菌株可以根据化学生态分类特征(例如 C 和 Cω7c 的脂肪酸百分比)、酶活性(例如 DNA 酶和半胱氨酸芳基酰胺酶)和利用的碳源(例如 L-木糖和 D-梅勒兹托斯)之间的 21 个差异,从其最近的遗传相关物中被区分出来,是一种新型亚种。系统发育分析和基因组比较显示与 Vibrio tetraodonis A511 密切相关,但总体基因组相关性指数表明 OCN044 是一个独特的亚种。基于多相特征、基因组和分类数据的差异,OCN044 代表 Vibrio tetraodonis A511 的一个新亚种,建议将其命名为 Vibrio tetraodonis subsp. pristinus subsp. nov.。模式菌株为 OCN044(=LMG 31895=DSM 111778)。

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