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双相障碍患者的代谢组学和蛋白质组学分析揭示了与止血相关的潜在分子特征。

Metabolomic and proteomic profiling in bipolar disorder patients revealed potential molecular signatures related to hemostasis.

机构信息

Laboratory of Bioanalytics and Integrated Omics (LaBIOmics), Institute of Chemistry, University of Campinas, PO Box 6154, Campinas, SP, 13083-970, Brazil.

Turku Bioscience Centre, University of Turku and Åbo Akademi University, 20520, Turku, Finland.

出版信息

Metabolomics. 2022 Aug 3;18(8):65. doi: 10.1007/s11306-022-01924-5.

Abstract

INTRODUCTION

Bipolar disorder (BD) is a mood disorder characterized by the occurrence of depressive episodes alternating with episodes of elevated mood (known as mania). There is also an increased risk of other medical comorbidities.

OBJECTIVES

This work uses a systems biology approach to compare BD treated patients with healthy controls (HCs), integrating proteomics and metabolomics data using partial correlation analysis in order to observe the interactions between altered proteins and metabolites, as well as proposing a potential metabolic signature panel for the disease.

METHODS

Data integration between proteomics and metabolomics was performed using GC-MS data and label-free proteomics from the same individuals (N = 13; 5 BD, 8 HC) using generalized canonical correlation analysis and partial correlation analysis, and then building a correlation network between metabolites and proteins. Ridge-logistic regression models were developed to stratify between BD and HC groups using an extended metabolomics dataset (N = 28; 14 BD, 14 HC), applying a recursive feature elimination for the optimal selection of the metabolites.

RESULTS

Network analysis demonstrated links between proteins and metabolites, pointing to possible alterations in hemostasis of BD patients. Ridge-logistic regression model indicated a molecular signature comprising 9 metabolites, with an area under the receiver operating characteristic curve (AUROC) of 0.833 (95% CI 0.817-0.914).

CONCLUSION

From our results, we conclude that several metabolic processes are related to BD, which can be considered as a multi-system disorder. We also demonstrate the feasibility of partial correlation analysis for integration of proteomics and metabolomics data in a case-control study setting.

摘要

简介

双相情感障碍(BD)是一种以抑郁发作和情绪高涨(即躁狂)发作为特征的心境障碍。它还会增加其他合并症的风险。

目的

本研究采用系统生物学方法,对双相情感障碍患者与健康对照(HC)进行比较,通过偏相关分析整合蛋白质组学和代谢组学数据,观察改变的蛋白质和代谢物之间的相互作用,并提出一种潜在的疾病代谢特征面板。

方法

使用气相色谱-质谱(GC-MS)数据和来自同一批个体的无标记蛋白质组学数据(N = 13;5 例 BD,8 例 HC),通过广义典型相关分析和偏相关分析进行蛋白质组学和代谢组学数据的整合,然后构建代谢物和蛋白质之间的相关网络。采用扩展代谢组学数据集(N = 28;14 例 BD,14 例 HC),使用递归特征消除对代谢物进行最优选择,建立基于岭逻辑回归的 BD 和 HC 分组分层模型。

结果

网络分析显示了蛋白质和代谢物之间的联系,表明 BD 患者的止血功能可能发生改变。岭逻辑回归模型显示了一个由 9 种代谢物组成的分子特征,其接受者操作特征曲线下面积(AUROC)为 0.833(95%CI 0.817-0.914)。

结论

我们的研究结果表明,多种代谢过程与双相情感障碍有关,双相情感障碍可被视为一种多系统疾病。我们还证明了偏相关分析在病例对照研究中整合蛋白质组学和代谢组学数据的可行性。

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