Department of Plant & Microbial Biology, University of California, Berkeleygrid.47840.3f, Berkeley, California, USA.
mSystems. 2022 Aug 30;7(4):e0028822. doi: 10.1128/msystems.00288-22. Epub 2022 Aug 4.
All organisms rely on complex metabolites such as amino acids, nucleotides, and cofactors for essential metabolic processes. Some microbes synthesize these fundamental ingredients of life , while others rely on uptake to fulfill their metabolic needs. Although certain metabolic processes are inherently "leaky," the mechanisms enabling stable metabolite provisioning among microbes in the absence of a host remain largely unclear. In particular, how can metabolite provisioning among free-living bacteria be maintained under the evolutionary pressure to economize resources? Salvaging, the process of "recycling and reusing," can be a metabolically efficient route to obtain access to required resources. Here, we show experimentally how precursor salvaging in engineered Escherichia coli populations can lead to stable, long-term metabolite provisioning. We find that salvaged cobamides (vitamin B and related enzyme cofactors) are readily made available to nonproducing population members, yet salvagers are strongly protected from overexploitation. We also describe a previously unnoted benefit of precursor salvaging, namely, the removal of the nonfunctional, proliferation-inhibiting precursor. As long as compatible precursors are present, any microbe possessing the terminal steps of a biosynthetic process can, in principle, forgo biosynthesis in favor of salvaging. Consequently, precursor salvaging likely represents a potent, yet overlooked, alternative to biosynthesis for the acquisition and provisioning of metabolites in free-living bacterial populations. Recycling gives new life to old things. Bacteria have the ability to recycle and reuse complex molecules they encounter in their environment to fulfill their basic metabolic needs in a resource-efficient way. By studying the salvaging (recycling and reusing) of vitamin B precursors, we found that metabolite salvaging can benefit others and provide stability to a bacterial community at the same time. Salvagers of vitamin B precursors freely share the result of their labor yet cannot be outcompeted by freeloaders, likely because salvagers retain preferential access to the salvaging products. Thus, salvaging may represent an effective, yet overlooked, mechanism of acquiring and provisioning nutrients in microbial populations.
所有生物都依赖于复杂的代谢物,如氨基酸、核苷酸和辅因子,以进行基本的代谢过程。有些微生物合成这些生命的基本成分,而有些微生物则依赖于摄取来满足其代谢需求。尽管某些代谢过程本质上是“有漏的”,但在没有宿主的情况下,微生物之间稳定提供代谢物的机制在很大程度上仍不清楚。特别是,在节约资源的进化压力下,自由生活的细菌之间如何能够维持代谢物的供应?回收利用是一种“回收和再利用”的代谢效率途径,可以获得所需的资源。在这里,我们通过实验展示了工程大肠杆菌群体中的前体回收如何导致稳定的、长期的代谢物供应。我们发现,回收的钴胺素(维生素 B 和相关酶辅因子)很容易提供给非生产性的群体成员,但回收者受到强烈的保护,不会被过度利用。我们还描述了前体回收的一个以前未被注意到的好处,即去除无功能的、抑制增殖的前体。只要存在相容的前体,任何具有生物合成过程末端步骤的微生物都可以原则上放弃生物合成,转而进行回收利用。因此,前体回收可能是自由生活细菌群体获取和供应代谢物的一种有效但被忽视的替代方法。回收为旧事物赋予新的生命。细菌有能力回收和再利用它们在环境中遇到的复杂分子,以节约资源的方式满足它们的基本代谢需求。通过研究维生素 B 前体的回收利用(回收和再利用),我们发现代谢物的回收利用可以使他人受益,并同时为细菌群落提供稳定性。维生素 B 前体的回收者自由分享他们的劳动成果,但不能被不劳而获者所竞争,可能是因为回收者保留了对回收产品的优先获取权。因此,回收可能是微生物种群获取和供应营养物质的一种有效但被忽视的机制。