Ding Yaoyu, Perez-Ortiz Gustavo, Peate Jessica, Barry Sarah M
Department of Chemistry, Faculty of Natural, Mathematical and Engineering Sciences, King's College London, London, United Kingdom.
Front Mol Biosci. 2022 Jul 22;9:908285. doi: 10.3389/fmolb.2022.908285. eCollection 2022.
The discovery of new enzymes, alongside the push to make chemical processes more sustainable, has resulted in increased industrial interest in the use of biocatalytic processes to produce high-value and chiral precursor chemicals. Huge strides in protein engineering methodology and tools have facilitated significant progress in the discovery and production of enzymes for biocatalytic processes. However, there are significant gaps in our knowledge of the relationship between enzyme structure and function. This has demonstrated the need for improved computational methods to model mechanisms and understand structure dynamics. Here, we explore efforts to rationally modify enzymes toward changing aspects of their catalyzed chemistry. We highlight examples of enzymes where links between enzyme function and structure have been made, thus enabling rational changes to the enzyme structure to give predictable chemical outcomes. We look at future directions the field could take and the technologies that will enable it.
新酶的发现,以及推动化学过程更具可持续性的努力,使得工业界对使用生物催化过程生产高价值手性前体化学品的兴趣日益浓厚。蛋白质工程方法和工具取得的巨大进展促进了生物催化过程中酶的发现和生产方面的显著进步。然而,我们在酶结构与功能关系的认识上存在重大差距。这表明需要改进计算方法来模拟机制并理解结构动力学。在此,我们探讨了合理修饰酶以改变其催化化学反应方面的努力。我们重点介绍了一些已建立酶功能与结构之间联系的酶的例子,从而能够对酶结构进行合理改变以获得可预测的化学结果。我们展望了该领域未来可能的发展方向以及将推动其发展的技术。