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一种形成八氢萘的天然狄尔斯-阿尔德酶的催化机制及对映选择性反转

Catalytic mechanism and -to- selectivity reversion of an octalin-forming natural Diels-Alderase.

作者信息

Sato Michio, Kishimoto Shinji, Yokoyama Mamoru, Jamieson Cooper S, Narita Kazuto, Maeda Naoya, Hara Kodai, Hashimoto Hiroshi, Tsunematsu Yuta, Houk Kendall N, Tang Yi, Watanabe Kenji

机构信息

Department of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, Japan.

Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.

出版信息

Nat Catal. 2021 Mar;4(3):223-232. doi: 10.1038/s41929-021-00577-2. Epub 2021 Mar 1.

Abstract

We have previously reported the identification of CghA, a proposed Diels-Alderase responsible for the formation of the bicyclic octalin core of the fungal secondary metabolite Sch210972. Here we show the crystal structure of the CghA-product complex at a resolution of 2.0 Å. Our result provides the second structural determination of eukaryotic Diels-Alderases and adds yet another fold to the family of proteins reported to catalyse [4 + 2] cycloaddition reactions. Site-directed mutagenesis-coupled kinetic characterization and computational analyses allowed us to identify key catalytic residues and propose a possible catalytic mechanism. Most interestingly, we were able to rationally engineer CghA such that the mutant was able to catalyse preferentially the formation of the energetically disfavoured adduct. This work expands our knowledge and understanding of the emerging and potentially widespread class of natural enzymes capable of catalysing stereoselective Diels-Alder reactions and paves the way towards developing enzymes potentially useful in various bio/synthetic applications.

摘要

我们之前报道了CghA的鉴定,它是一种被认为负责真菌次级代谢产物Sch210972双环辛烷核心形成的狄尔斯-阿尔德酶。在此,我们展示了分辨率为2.0 Å的CghA-产物复合物的晶体结构。我们的结果提供了真核狄尔斯-阿尔德酶的第二个结构测定,并为据报道催化[4 + 2]环加成反应的蛋白质家族增添了另一种折叠形式。定点诱变结合动力学表征和计算分析使我们能够鉴定关键催化残基并提出一种可能的催化机制。最有趣的是,我们能够合理改造CghA,使突变体能够优先催化能量上不利的加合物的形成。这项工作扩展了我们对能够催化立体选择性狄尔斯-阿尔德反应的新兴且可能广泛存在的天然酶类的认识和理解,并为开发可能在各种生物/合成应用中有用的酶铺平了道路。

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本文引用的文献

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