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杂草型水稻(f.)的完整叶绿体基因组。

The complete chloroplast genome of type weedy rice ( f. ).

作者信息

Hu Yiyu, Dong Chenfeng, Ye Chuyu, Fan Longjiang, Tang Wei

机构信息

Zhongyuan Institute, Zhejiang University, Zhengzhou, China.

Institute of Crop Sciences, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2022 Aug 1;7(8):1418-1420. doi: 10.1080/23802359.2022.2106160. eCollection 2022.

Abstract

As a noxious weed, weedy rice ( f. Roshev. 1931) has threatened global food security and sustainable crop production. On the other hand, weedy rice has a strong tolerance for abiotic stresses and the potential to provide rich resources for rice genetic improvement. Thus, for a more comprehensive understanding of its speciation, we sequenced and assembled the first complete chloroplast genome of f. ( type). The complete chloroplast genome was 134,555 bp in length and encoded 133 genes, including 83 protein-coding genes, 42 tRNA genes and 8 rRNA genes. Phylogenetic analysis revealed that the indica-japonica differentiation of weedy rice was closely related to cultivated rice, and f. ( type) was genetically more closely clustered with cultivated rice ( type) than or other wild rice.

摘要

作为一种有害杂草,杂草稻(f. Roshev. 1931)已威胁到全球粮食安全和作物的可持续生产。另一方面,杂草稻对非生物胁迫具有较强的耐受性,并且有可能为水稻遗传改良提供丰富的资源。因此,为了更全面地了解其物种形成,我们对f. (模式)的首个完整叶绿体基因组进行了测序和组装。完整的叶绿体基因组长度为134,555 bp,编码133个基因,包括83个蛋白质编码基因、42个tRNA基因和8个rRNA基因。系统发育分析表明,杂草稻的籼粳分化与栽培稻密切相关,并且f. (模式)在遗传上与栽培稻(模式)的聚类比或其他野生稻更为紧密。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2798/9347469/20fd1e97ee81/TMDN_A_2106160_F0001_B.jpg

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