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在甲酸盐存在下,非有机金属钌(II)多吡啶胺配合物催化NAD辅酶还原机制的电子效应

Electronic effects on the mechanism of the NAD coenzyme reduction catalysed by a non-organometallic ruthenium(ii) polypyridyl amine complex in the presence of formate.

作者信息

Chrzanowska Marta, Katafias Anna, van Eldik Rudi, Conradie Jeanet

机构信息

Faculty of Chemistry, Nicolaus Copernicus University in Toruń Gagarina 7 87-100 Toruń Poland

Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg Egerlandstr. 1 91058 Erlangen Germany.

出版信息

RSC Adv. 2022 Aug 1;12(33):21191-21202. doi: 10.1039/d2ra01890j. eCollection 2022 Jul 21.

DOI:10.1039/d2ra01890j
PMID:35975079
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9341502/
Abstract

In the present study, electronic effects on the mechanism of the NAD coenzyme reduction in the presence of formate, catalysed by a non-organometallic ruthenium(ii) polypyridyl amine complex, were investigated. The [Ru(terpy)(ampy)Cl]Cl (terpy = 2,2':6',2''-terpyridine, ampy = 2-(aminomethyl)pyridine) complex was employed as the catalyst. The reactions were studied in a water/ethanol mixture as a function of formate, catalyst, and NAD concentrations at 37 °C. The overall process was found to be 11 to 18 times slower than for the corresponding ethylenediamine (en) complex as the result of π-back bonding effects of the ampy ligand. The mechanistic studies revealed a complete set of reactions that accounted for the overall catalytic cycle based on a formate-induced hydride transfer reaction to form the reduced coenzyme, NADH. The geometries of the ruthenium(ii)-ampy complexes involved in the catalytic cycle and free energy changes for the main steps were predicted by DFT calculations. Similar calculations were also performed for the analogues ruthenium(ii)-en and ruthenium(ii)-bipy complexes (bipy = 2,2'-bipyridine). The DFT calculated energies show that both the solvent-formato exchange and the formato-hydrido conversion reactions have negative (favourable) energies to proceed spontaneously. The reactions involving the en complex have the more negative (favourable) reaction energies, followed by the ampy complex, in agreement with faster reactions for en complexes and slower reactions for bipy complexes than for ampy complexes.

摘要

在本研究中,研究了非有机金属钌(II)多吡啶胺配合物催化下,电子效应在甲酸盐存在时对NAD辅酶还原机制的影响。采用[Ru(terpy)(ampy)Cl]Cl(terpy = 2,2':6',2''-三联吡啶,ampy = 2-(氨甲基)吡啶)配合物作为催化剂。在37℃下,在水/乙醇混合物中研究了反应随甲酸盐、催化剂和NAD浓度的变化。由于ampy配体的π-反馈键合效应,发现整个过程比相应的乙二胺(en)配合物慢11至18倍。机理研究揭示了一组完整的反应,这些反应基于甲酸盐诱导的氢化物转移反应形成还原辅酶NADH,从而解释了整个催化循环。通过密度泛函理论(DFT)计算预测了催化循环中涉及的钌(II)-ampy配合物的几何结构以及主要步骤的自由能变化。对类似的钌(II)-en和钌(II)-bipy配合物(bipy = 2,2'-联吡啶)也进行了类似的计算。DFT计算的能量表明,溶剂-甲酸盐交换和甲酸盐-氢化物转化反应都具有负(有利)能量,可以自发进行。涉及en配合物的反应具有更负(有利)的反应能量,其次是ampy配合物,这与en配合物反应更快、bipy配合物反应比ampy配合物慢的结果一致。

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