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鉴定用于儿童哮喘诊断的新型血清 microRNA 生物标志物组合。

Identifying a novel serum microRNA biomarker panel for the diagnosis of childhood asthma.

机构信息

College of Life and Environmental Science, Hangzhou Normal University, Hangzhou 311121, China.

Department of Academic Journals, Hangzhou Normal University, Hangzhou 311121, China.

出版信息

Exp Biol Med (Maywood). 2022 Oct;247(19):1732-1740. doi: 10.1177/15353702221114870. Epub 2022 Aug 23.

Abstract

The pathological mechanism of childhood asthma is complex, and timely diagnosis is the key to effective prevention and control of childhood asthma. We collected 170 serum samples from 95 children with asthma and 75 healthy children. Serum miRNA biomarkers were analyzed by Illumina sequencing for childhood asthma. Differentially serum miRNAs were confirmed with quantitative reverse transcription polymerase chain reaction (qRT-PCR) assay. The Illumina sequencing data showed the differential expression of 111 serum miRNAs among asthmatic and healthy children. After confirmation of miRNAs expression through qRT-PCR, four of them (namely hsa-miR-106a-5p, hsa-miR-18a-5p, hsa-miR-144-3p, and hsa-miR-375) manifested significant differential expression between asthmatic children and healthy controls. The biomarkers classification tree model created with these four miRNAs using the Biomarker Patterns Software could effectively separate childhood asthma and healthy children, with a specificity of 88.3%, a sensitivity of 95.0%, and an area under the curve (AUC) value of 0.942. The regulatory networks containing miRNAs and their gene targets suggested that the four miRNAs might have gene targets implicated in inflammation, immunity, and transcriptional efficiency. Taken together, this four-serum-miRNA panel is a promising biomarker to diagnose childhood asthma noninvasively.

摘要

儿童哮喘的病理机制复杂,及时诊断是有效防治儿童哮喘的关键。我们收集了 95 例哮喘儿童和 75 例健康儿童的 170 份血清样本。采用 Illumina 测序技术对儿童哮喘的血清 miRNA 生物标志物进行分析。采用定量逆转录聚合酶链反应(qRT-PCR)检测验证差异表达的血清 miRNA。Illumina 测序数据显示,哮喘儿童和健康儿童的血清 miRNA 存在 111 个差异表达。通过 qRT-PCR 验证 miRNA 表达后,其中 4 个(即 hsa-miR-106a-5p、hsa-miR-18a-5p、hsa-miR-144-3p 和 hsa-miR-375)在哮喘儿童和健康对照者之间表现出明显的差异表达。使用 Biomarker Patterns 软件创建的包含这 4 个 miRNA 的生物标志物分类树模型可以有效地将儿童哮喘与健康儿童区分开来,特异性为 88.3%,敏感性为 95.0%,曲线下面积(AUC)值为 0.942。包含 miRNA 和其基因靶标的调控网络表明,这 4 个 miRNA 可能具有与炎症、免疫和转录效率相关的基因靶标。总之,这个四血清-miRNA 谱是一种有前途的无创诊断儿童哮喘的生物标志物。

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