Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, China.
Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
Cells. 2022 Aug 18;11(16):2577. doi: 10.3390/cells11162577.
The (PVY) is responsible for huge economic losses for the potato industry worldwide and is the fifth most consequential plant virus globally. The main strategies for virus control are to limit aphid vectors, produce virus-free seed potatoes, and breed virus-resistant varieties. The breeding of PVY-resistant varieties is the safest and most effective method in terms of cost and environmental protection. , a gene that confers extreme resistance to PVY, is from , which is a wild diploid potato species that is widely used in many PVY-resistant breeding projects. In this study, was fine mapped and successfully cloned from accession 40-3. We demonstrated that encodes a TIR-NLR protein by stably transforming a diploid susceptible cultivar named AC142 and a tetraploid potato variety named E3. The conferred extreme resistance to PVY, PVY and PVY in both of the genotypes. To investigate the genetic events occurring during the evolution of the locus, we sequenced 160 homologs from 13 genotypes. Based on the pattern of sequence identities, 160 homologs were divided into 11 families. In Family 11 including , we found evidence for Type I evolutionary patterns with frequent sequence exchanges, obscured orthologous relationships and high non-synonymous to synonymous substitutions (Ka/Ks), which is consistent with rapid diversification and positive selection in response to rapid changes in the PVY genomes. Furthermore, a functional marker named MG64-17 was developed in this study that indicates the phenotype with 100% accuracy and, therefore, can be used for marker-assisted selection in breeding programs that use as a breeding resource.
PVY 是造成全球马铃薯产业巨大经济损失的元凶,也是全球第五大重要植物病毒。防治病毒的主要策略是限制蚜虫媒介、生产无病毒马铃薯种薯和培育抗病毒品种。培育抗病毒品种在成本和环境保护方面是最安全和最有效的方法。是一种赋予马铃薯对 PVY 极端抗性的基因,来源于 Solanum commersonii,这是一种广泛用于许多 PVY 抗性育种项目的野生二倍体马铃薯种。在这项研究中,从 40-3 号品系中精细定位并成功克隆了 。我们通过稳定转化二倍体易感品种 AC142 和四倍体马铃薯品种 E3 证明 编码 TIR-NLR 蛋白。该基因赋予了两个基因型对 PVY、PVY 和 PVY 的极端抗性。为了研究 基因座进化过程中发生的遗传事件,我们从 13 个基因型中测序了 160 个 同源物。基于序列同一性模式,将 160 个同源物分为 11 个家族。在包括 在内的家族 11 中,我们发现了证据表明存在频繁发生序列交换、混淆直系同源关系和高非同义替换与同义替换(Ka/Ks)的 I 型进化模式,这与快速多样化和对 PVY 基因组快速变化的正选择一致。此外,本研究还开发了一个名为 MG64-17 的功能标记,该标记能以 100%的准确率指示表型,因此可用于利用 作为育种资源的抗病育种计划中的标记辅助选择。