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本文引用的文献

1
RefPlantNLR is a comprehensive collection of experimentally validated plant disease resistance proteins from the NLR family.RefPlantNLR 是一个综合性的 NLR 家族植物抗病蛋白实验验证数据库。
PLoS Biol. 2021 Oct 20;19(10):e3001124. doi: 10.1371/journal.pbio.3001124. eCollection 2021 Oct.
2
Pattern-recognition receptors are required for NLR-mediated plant immunity.模式识别受体是 NLR 介导的植物免疫所必需的。
Nature. 2021 Apr;592(7852):105-109. doi: 10.1038/s41586-021-03316-6. Epub 2021 Mar 10.
3
Mutual potentiation of plant immunity by cell-surface and intracellular receptors.细胞表面和细胞内受体增强植物免疫。
Nature. 2021 Apr;592(7852):110-115. doi: 10.1038/s41586-021-03315-7. Epub 2021 Mar 10.
4
Analysis of intraspecies diversity reveals a subset of highly variable plant immune receptors and predicts their binding sites.种内多样性分析揭示了一组高度可变的植物免疫受体亚群,并预测了它们的结合位点。
Plant Cell. 2021 May 31;33(4):998-1015. doi: 10.1093/plcell/koab013.
5
Variation Patterns of NLR Clusters in Genomes.NLR 基因簇在基因组中的变异模式。
Plant Commun. 2020 Jun 24;1(4):100089. doi: 10.1016/j.xplc.2020.100089. eCollection 2020 Jul 13.
6
Genome and time-of-day transcriptome of link morphological minimization with gene loss and less growth control.基因组和一天中不同时间的转录组将形态最小化与基因丢失及生长控制减弱联系起来。
Genome Res. 2021 Feb;31(2):225-238. doi: 10.1101/gr.266429.120. Epub 2020 Dec 23.
7
Structure of the activated ROQ1 resistosome directly recognizing the pathogen effector XopQ.激活的 ROQ1 抵抗体的结构,直接识别病原体效应物 XopQ。
Science. 2020 Dec 4;370(6521). doi: 10.1126/science.abd9993.
8
Evolution of multiple postzygotic barriers between species of the Mimulus tilingii complex.拟南芥属 tilingii 复合体种间多次合子后障碍的进化。
Evolution. 2021 Mar;75(3):600-613. doi: 10.1111/evo.14105. Epub 2020 Oct 26.
9
European maize genomes highlight intraspecies variation in repeat and gene content.欧洲玉米基因组突出了种内重复序列和基因组成的变异。
Nat Genet. 2020 Sep;52(9):950-957. doi: 10.1038/s41588-020-0671-9. Epub 2020 Jul 27.
10
Plant NLRs get by with a little help from their friends.植物 NLR 蛋白:朋友的一点小帮助,就可以让它们运转自如。
Curr Opin Plant Biol. 2020 Aug;56:99-108. doi: 10.1016/j.pbi.2020.04.006. Epub 2020 Jun 14.

植物 NLR 多样性:泛 NLRome 中的已知未知。

Plant NLR diversity: the known unknowns of pan-NLRomes.

机构信息

Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 T�bingen, Germany.

出版信息

Plant Cell. 2021 May 31;33(4):814-831. doi: 10.1093/plcell/koaa002.

DOI:10.1093/plcell/koaa002
PMID:33793812
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8226294/
Abstract

Plants and pathogens constantly adapt to each other. As a consequence, many members of the plant immune system, and especially the intracellular nucleotide-binding site leucine-rich repeat receptors, also known as NOD-like receptors (NLRs), are highly diversified, both among family members in the same genome, and between individuals in the same species. While this diversity has long been appreciated, its true extent has remained unknown. With pan-genome and pan-NLRome studies becoming more and more comprehensive, our knowledge of NLR sequence diversity is growing rapidly, and pan-NLRomes provide powerful platforms for assigning function to NLRs. These efforts are an important step toward the goal of comprehensively predicting from sequence alone whether an NLR provides disease resistance, and if so, to which pathogens.

摘要

植物和病原体不断地相互适应。因此,植物免疫系统的许多成员,特别是细胞内核苷酸结合位点富含亮氨酸重复受体,也称为 NOD 样受体 (NLRs),在同一基因组中的家族成员之间以及同一物种的个体之间高度多样化。虽然这种多样性早就被人们所认识,但它的真正程度一直未知。随着泛基因组和泛 NLRome 研究变得越来越全面,我们对 NLR 序列多样性的认识正在迅速增长,而泛 NLRome 为赋予 NLR 功能提供了强大的平台。这些努力是朝着仅从序列全面预测 NLR 是否提供抗病性以及如果提供,针对哪些病原体的目标迈出的重要一步。