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结直肠癌中临床相关长链非编码RNA的发现与验证

Discovery and Validation of Clinically Relevant Long Non-Coding RNAs in Colorectal Cancer.

作者信息

Snyder Madison, Iraola-Guzmán Susana, Saus Ester, Gabaldón Toni

机构信息

Barcelona Supercomputing Centre (BSC-CNS), Plaça Eusebi Güell, 1-3, 08034 Barcelona, Spain.

Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, 08028 Barcelona, Spain.

出版信息

Cancers (Basel). 2022 Aug 10;14(16):3866. doi: 10.3390/cancers14163866.

Abstract

Colorectal cancer (CRC) is the third most prevalent cancer worldwide, with nearly two million newly diagnosed cases each year. The survival of patients with CRC greatly depends on the cancer stage at the time of diagnosis, with worse prognosis for more advanced cases. Consequently, considerable effort has been directed towards improving population screening programs for early diagnosis and identifying prognostic markers that can better inform treatment strategies. In recent years, long non-coding RNAs (lncRNAs) have been recognized as promising molecules, with diagnostic and prognostic potential in many cancers, including CRC. Although large-scale genome and transcriptome sequencing surveys have identified many lncRNAs that are altered in CRC, most of their roles in disease onset and progression remain poorly understood. Here, we critically review the variety of detection methods and types of supporting evidence for the involvement of lncRNAs in CRC. In addition, we provide a reference catalog that features the most clinically relevant lncRNAs in CRC. These lncRNAs were selected based on recent studies sorted by stringent criteria for both supporting experimental evidence and reproducibility.

摘要

结直肠癌(CRC)是全球第三大常见癌症,每年新诊断病例近200万。CRC患者的生存率很大程度上取决于诊断时的癌症分期,晚期病例的预后更差。因此,人们付出了相当大的努力来改进人群筛查计划以进行早期诊断,并识别能够更好地指导治疗策略的预后标志物。近年来,长链非编码RNA(lncRNAs)已被认为是有前景的分子,在包括CRC在内的许多癌症中具有诊断和预后潜力。尽管大规模基因组和转录组测序调查已鉴定出许多在CRC中发生改变的lncRNAs,但它们在疾病发生和进展中的大多数作用仍知之甚少。在这里,我们批判性地综述了lncRNAs参与CRC的各种检测方法和支持证据类型。此外,我们提供了一个参考目录,列出了CRC中最具临床相关性的lncRNAs。这些lncRNAs是根据最近的研究选择的,这些研究按照严格的标准进行分类,以确保支持性实验证据和可重复性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7465/9405614/c7b21a028988/cancers-14-03866-g001.jpg

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