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南非自由州大豆(L.)根际微生物群落的功能多样性。

Functional Diversity of Microbial Communities in the Soybean ( L.) Rhizosphere from Free State, South Africa.

机构信息

Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Private Bag X2046, Mmabatho 2735, South Africa.

出版信息

Int J Mol Sci. 2022 Aug 20;23(16):9422. doi: 10.3390/ijms23169422.

Abstract

The plant microbiome is involved in enhancing nutrient acquisition, plant growth, stress tolerance, and reducing chemical inputs. The identification of microbial functional diversity offers the chance to evaluate and engineer them for various agricultural processes. Using a shotgun metagenomics technique, this study examined the functional diversity and metabolic potentials of microbial communities in the rhizosphere of soybean genotype link 678. The dominant genera are , , , , and . Twenty-one functional categories were present, with fourteen of the functions being dominant in all samples. The dominant functions include carbohydrates, fatty acids, lipids and isoprenoids, amino acids and derivatives, sulfur metabolism, and nitrogen metabolism. A Kruskal-Wallis test was used to test samples' diversity differences. There was a significant difference in the alpha diversity. ANOSIM was used to analyze the similarities of the samples and there were significant differences between the samples. Phosphorus had the highest contribution of 64.3% and was more prominent among the soil properties that influence the functional diversity of the samples. Given the functional groups reported in this study, soil characteristics impact the functional role of the rhizospheric microbiome of soybean.

摘要

植物微生物组参与增强养分获取、植物生长、抗逆性,并减少化学投入。微生物功能多样性的鉴定为评估和工程化应用于各种农业过程提供了机会。本研究采用高通量宏基因组学技术,研究了大豆基因型 link 678 根际微生物群落的功能多样性和代谢潜力。优势属为 、 、 、 、 。共存在 21 个功能类别,其中 14 个功能在所有样本中占主导地位。主要功能包括碳水化合物、脂肪酸、脂质和异戊二烯、氨基酸及其衍生物、硫代谢和氮代谢。Kruskal-Wallis 检验用于检验样本多样性差异。α多样性存在显著差异。采用非度量多维标度(ANOSIM)分析样本之间的相似性,样本之间存在显著差异。磷的贡献最高,为 64.3%,在影响样本功能多样性的土壤特性中更为突出。考虑到本研究中报告的功能群,土壤特征影响大豆根际微生物组的功能作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7240/9409019/03c45cda868a/ijms-23-09422-g001.jpg

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