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多倍体物种的稳健性和广域生态位:是基因组冲击还是渐进演化?

Robustness and the generalist niche of polyploid species: Genome shock or gradual evolution?

机构信息

Department of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zürich, Switzerland; Kihara Institute for Biological Research, Yokohama City University, 641-12 Maioka, 244-0813 Totsuka-ward, Yokohama, Japan.

出版信息

Curr Opin Plant Biol. 2022 Oct;69:102292. doi: 10.1016/j.pbi.2022.102292. Epub 2022 Sep 2.

Abstract

The prevalence of polyploidy in wild and crop species has stimulated debate over its evolutionary advantages and disadvantages. Previous studies have focused on changes occurring at the polyploidization events, including genome-wide changes termed "genome shock," as well as ancient polyploidy. Recent bioinformatics advances and empirical studies of Arabidopsis and wheat relatives are filling a research gap: the functional evolutionary study of polyploid species using RNA-seq, DNA polymorphism, and epigenomics. Polyploid species can become generalists in natura through environmental robustness by inheriting and merging parental stress responses. Their evolvability is enhanced by mutational robustness working on inherited standing variation. The identification of key genes responsible for gradual adaptive evolution will encourage synthetic biological approaches to transfer polyploid advantages to other species.

摘要

多倍体在野生和栽培物种中的普遍性引发了关于其进化优势和劣势的争论。以前的研究集中在多倍体化事件中发生的变化,包括被称为“基因组冲击”的全基因组变化,以及古老的多倍体。最近的生物信息学进展和对拟南芥和小麦近缘种的实证研究填补了一个研究空白:利用 RNA-seq、DNA 多态性和表观基因组学对多倍体物种进行功能进化研究。多倍体物种可以通过继承和融合亲本的应激反应,在自然环境中成为通才,从而具有环境稳健性。它们的进化能力通过遗传的固定变异上的突变稳健性得到增强。鉴定负责逐步适应进化的关键基因将鼓励采用合成生物学方法将多倍体优势转移到其他物种。

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