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多倍体:其后果及其在植物多样化和进化中的作用。

Polyploidy: its consequences and enabling role in plant diversification and evolution.

机构信息

Key Laboratory of Plant Resources Conservation and Sustainable Utilization/Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.

University of Leicester, Institute for Environmental Futures, Department of Genetics and Genome Biology, Leicester, LE1 7RH, UK.

出版信息

Ann Bot. 2023 Feb 7;131(1):1-10. doi: 10.1093/aob/mcac132.

Abstract

BACKGROUND

Most, if not all, green plant (Virdiplantae) species including angiosperms and ferns are polyploids themselves or have ancient polyploid or whole genome duplication signatures in their genomes. Polyploids are not only restricted to our major crop species such as wheat, maize, potato and the brassicas, but also occur frequently in wild species and natural habitats. Polyploidy has thus been viewed as a major driver in evolution, and its influence on genome and chromosome evolution has been at the centre of many investigations. Mechanistic models of the newly structured genomes are being developed that incorporate aspects of sequence evolution or turnover (low-copy genes and regulatory sequences, as well as repetitive DNAs), modification of gene functions, the re-establishment of control of genes with multiple copies, and often meiotic chromosome pairing, recombination and restoration of fertility.

SCOPE

World-wide interest in how green plants have evolved under different conditions - whether in small, isolated populations, or globally - suggests that gaining further insight into the contribution of polyploidy to plant speciation and adaptation to environmental changes is greatly needed. Forward-looking research and modelling, based on cytogenetics, expression studies, and genomics or genome sequencing analyses, discussed in this Special Issue of the Annals of Botany, consider how new polyploids behave and the pathways available for genome evolution. They address fundamental questions about the advantages and disadvantages of polyploidy, the consequences for evolution and speciation, and applied questions regarding the spread of polyploids in the environment and challenges in breeding and exploitation of wild relatives through introgression or resynthesis of polyploids.

CONCLUSION

Chromosome number, genome size, repetitive DNA sequences, genes and regulatory sequences and their expression evolve following polyploidy - generating diversity and possible novel traits and enabling species diversification. There is the potential for ever more polyploids in natural, managed and disturbed environments under changing climates and new stresses.

摘要

背景

大多数(如果不是全部)绿色植物(Viridiplantae)物种,包括被子植物和蕨类植物,本身就是多倍体,或者在其基因组中具有古老的多倍体或全基因组重复的特征。多倍体不仅限于我们的主要作物物种,如小麦、玉米、土豆和芸薹属植物,而且在野生物种和自然栖息地中也经常出现。因此,多倍体被视为进化的主要驱动力,其对基因组和染色体进化的影响一直是许多研究的中心。新结构基因组的机制模型正在被开发出来,这些模型纳入了序列进化或更替的方面(低拷贝基因和调控序列,以及重复 DNA)、基因功能的修饰、多个拷贝基因控制的重新建立,以及经常的减数分裂染色体配对、重组和育性的恢复。

范围

全世界都对绿色植物在不同条件下的进化感兴趣——无论是在小而孤立的种群中,还是在全球范围内——这表明,深入了解多倍体对植物物种形成和适应环境变化的贡献是非常需要的。基于细胞遗传学、表达研究以及基因组学或基因组测序分析的前瞻性研究和建模,在本期《植物学年鉴》的特刊中进行了讨论,探讨了新的多倍体的行为以及基因组进化的途径。它们解决了关于多倍体的优势和劣势、进化和物种形成的后果、以及多倍体在环境中的传播以及通过导入或重新合成多倍体来杂交和利用野生亲缘种的应用问题的基本问题。

结论

染色体数目、基因组大小、重复 DNA 序列、基因和调控序列及其表达在多倍体之后进化——产生多样性和可能的新特征,并使物种多样化。在气候变化和新压力下的自然、管理和受干扰的环境中,可能会有更多的多倍体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e6e/9904344/e2234855809c/mcac132_fig1.jpg

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