Wang Yalin, Zhu Wenyan, Ren Fei, Zhao Na, Xu Shixiao, Sun Ping
College of Animal Science and Technology, Henan University of Science and Technology, Luoyang 471003, China.
Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China.
Plants (Basel). 2022 Aug 30;11(17):2251. doi: 10.3390/plants11172251.
Grazing, as an important land use method in grassland, has a significant impact on the morphological and physiological traits of plants. However, little is known about how the molecular mechanism of plant responds to different grazing intensities. Here, we investigated the response of to light grazing and heavy grazing intensities in comparison with a non-grazing control. Using de novo transcriptome assembly, leaves were compared for the expression of the different genes under different grazing intensities in natural grassland. In total, 194,253 transcripts were de novo assembled and comprised in nine leaf tissues. Among them, 11,134 and 9058 genes were differentially expressed in light grazing and heavy grazing grassland separately, with 5867 genes that were identified as co-expression genes in two grazing treatments. The Nr, SwissProt, String, GO, KEGG, and COG analyses by BLASTx searches were performed to determine and further understand the biological functions of those differentially expressed genes (DEGs). Analysis of the expression patterns of 10 DEGs by quantitative real-time RT-PCR (qRT-PCR) confirmed the accuracy of the RNA-Seq results. Based on a comparative transcriptome analysis, the most significant transcriptomic changes that were observed under grazing intensity were related to plant hormone and signal transduction pathways, carbohydrate and secondary metabolism, and photosynthesis. In addition, heavy grazing resulted in a stronger transcriptomic response compared with light grazing through increasing the of the secondary metabolism- and photosynthesis-related genes. These changes in key pathways and related genes suggest that they may synergistically respond to grazing to increase the resilience and stress tolerance of . Our findings provide important clues for improving grassland use and protection and understanding the molecular mechanisms of plant response to grazing.
放牧作为草原重要的土地利用方式,对植物的形态和生理特征有显著影响。然而,关于植物如何通过分子机制响应不同放牧强度的了解却很少。在此,我们研究了[植物名称]对轻度放牧和重度放牧强度的响应,并与非放牧对照进行比较。利用从头转录组组装技术,比较了天然草地中不同放牧强度下[植物名称]叶片不同基因的表达情况。总共从头组装了194,253个转录本,并包含在九个叶片组织中。其中,分别在轻度放牧和重度放牧草地中有11,134个和9058个基因差异表达,有5867个基因在两种放牧处理中被鉴定为共表达基因。通过BLASTx搜索进行Nr、SwissProt、String、GO、KEGG和COG分析,以确定并进一步了解这些差异表达基因(DEGs)的生物学功能。通过定量实时RT-PCR(qRT-PCR)对10个DEGs的表达模式进行分析,证实了RNA-Seq结果的准确性。基于比较转录组分析,在放牧强度下观察到的最显著的转录组变化与植物激素和信号转导途径、碳水化合物和次生代谢以及光合作用有关。此外,重度放牧通过增加次生代谢和光合作用相关基因的[具体指标],与轻度放牧相比导致更强的转录组反应。关键途径和相关基因的这些变化表明,它们可能协同响应放牧以提高[植物名称]的恢复力和胁迫耐受性。我们的研究结果为改善草地利用和保护以及理解植物对放牧响应的分子机制提供了重要线索。