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紫花苜蓿中与不同放牧强度下再生过程相关的转录组反应

Transcriptome Responses in (Alfalfa) Associated with Regrowth Process in Different Grazing Intensities.

作者信息

Sun Dingyi, Wang Yalin, Zhao Na

机构信息

International Education College, Nanjing Forestry University, Nanjing 210037, China.

Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China.

出版信息

Plants (Basel). 2024 Sep 30;13(19):2738. doi: 10.3390/plants13192738.

Abstract

L. (alfalfa), a perennial legume, is generally regarded as a valuable source of protein for livestock and is subjected to long and repeated grazing in natural pastures. Studying the molecular response mechanism of alfalfa under different grazing treatments is crucial for understanding its adaptive traits and is of great significance for cultivating grazing-tolerant grass. Here, we performed a transcriptomic analysis to investigate changes in the gene expression of under three grazing intensities. In total, 4184 differentially expressed genes (DEGs) were identified among the tested grazing intensities. The analysis of gene ontology (GO) revealed that genes were primarily enriched in cells, cellular processes, metabolic processes, and binding. In addition, two pathways, the plant-pathogen interaction pathway and the plant hormone signal pathway, showed significant enrichment in the Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Protein kinases and transcription factors associated with hormones and plant immunity were identified. The plant immunity-related genes were more activated under high grazing treatment, while more genes related to regeneration were expressed under light grazing treatment. These results suggest that exhibits different strategies to increase resilience and stress resistance under various grazing intensities. Our findings provide important clues and further research directions for understanding the molecular mechanisms of plant responses to grazing.

摘要

紫花苜蓿是一种多年生豆科植物,通常被认为是家畜蛋白质的重要来源,并且在天然牧场中会遭受长期且反复的放牧。研究紫花苜蓿在不同放牧处理下的分子响应机制对于理解其适应性特征至关重要,对于培育耐放牧草种具有重要意义。在此,我们进行了转录组分析,以研究紫花苜蓿在三种放牧强度下基因表达的变化。在测试的放牧强度中总共鉴定出4184个差异表达基因(DEG)。基因本体论(GO)分析表明,基因主要富集在细胞、细胞过程、代谢过程和结合方面。此外,在京都基因与基因组百科全书(KEGG)分析中,植物 - 病原体相互作用途径和植物激素信号途径显示出显著富集。鉴定出了与激素和植物免疫相关的蛋白激酶和转录因子。与植物免疫相关的基因在高放牧处理下更活跃,而与再生相关的更多基因在轻度放牧处理下表达。这些结果表明,紫花苜蓿在不同放牧强度下表现出不同的策略来提高恢复力和抗逆性。我们的研究结果为理解植物对放牧响应的分子机制提供了重要线索和进一步的研究方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a27b/11479129/913750699cb4/plants-13-02738-g001.jpg

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