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从尼日利亚三角州石油污染土壤中分离出的铜绿假单胞菌AS_23的基因组序列草图

Draft Genome Sequence of Pseudomonas aeruginosa AS_23, Isolated from Petroleum-Contaminated Soil in Delta State, Nigeria.

作者信息

Kutshik Richard J, Okenmor Grace A, Longdet Ishaya Y

机构信息

Department of Biochemistry, University of Jos, Jos, Nigeria.

出版信息

Microbiol Resour Announc. 2022 Oct 20;11(10):e0077422. doi: 10.1128/mra.00774-22. Epub 2022 Sep 12.

DOI:10.1128/mra.00774-22
PMID:36094209
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9583793/
Abstract

Pseudomonas aeruginosa AS_23 was isolated from petroleum-contaminated soil in Nigeria. Here, we present the draft genome sequence, consisting of an 6,760,157-bp genome with 6,348 protein-coding sequences, 6,253 functionally assigned genes, and 61 RNA genes. Average nucleotide identity-based whole-genome comparisons suggest that this is a new strain of Pseudomonas aeruginosa.

摘要

铜绿假单胞菌AS_23是从尼日利亚受石油污染的土壤中分离出来的。在此，我们展示了该菌株的基因组草图序列，其基因组大小为6,760,157碱基对，包含6,348个蛋白质编码序列、6,253个功能已确定的基因以及61个RNA基因。基于平均核苷酸同一性的全基因组比较表明，这是铜绿假单胞菌的一个新菌株。

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Microbiol Resour Announc. 2021 Jan 14;10(2):e01017-20. doi: 10.1128/MRA.01017-20.
2
MUMmer4: A fast and versatile genome alignment system.MUMmer4：一种快速且通用的基因组比对系统。
PLoS Comput Biol. 2018 Jan 26;14(1):e1005944. doi: 10.1371/journal.pcbi.1005944. eCollection 2018 Jan.
3
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
4
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
5
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
6
Pseudomonas aeruginosa Genomic Structure and Diversity.铜绿假单胞菌基因组结构与多样性。
Front Microbiol. 2011 Jul 13;2:150. doi: 10.3389/fmicb.2011.00150. eCollection 2011.