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双轮群体揭示了大麦粒大小的遗传结构。

The double round-robin population unravels the genetic architecture of grain size in barley.

机构信息

Institute for Quantitative Genetics and Genomics of Plants, Biology Department, Heinrich Heine University, Dusseldorf, Germany.

Max Planck Institute for Plant Breeding Research, Cologne, Germany.

出版信息

J Exp Bot. 2022 Dec 8;73(22):7344-7361. doi: 10.1093/jxb/erac369.

Abstract

Grain number, size and weight primarily determine the yield of barley. Although the genes regulating grain number are well studied in barley, the genetic loci and the causal gene for sink capacity are poorly understood. Therefore, the primary objective of our work was to dissect the genetic architecture of grain size and weight in barley. We used a multi-parent population developed from a genetic cross between 23 diverse barley inbreds in a double round-robin design. Seed size-related parameters such as grain length, grain width, grain area and thousand-grain weight were evaluated in the HvDRR population comprising 45 recombinant inbred line sub-populations. We found significant genotypic variation for all seed size characteristics, and observed 84% or higher heritability across four environments. The quantitative trait locus (QTL) detection results indicate that the genetic architecture of grain size is more complex than previously reported. In addition, both cultivars and landraces contributed positive alleles at grain size QTLs. Candidate genes identified using genome-wide variant calling data for all parental inbred lines indicated overlapping and potential novel regulators of grain size in cereals. Furthermore, our results indicated that sink capacity was the primary determinant of grain weight in barley.

摘要

粒数、大小和重量主要决定了大麦的产量。尽管控制粒数的基因在大麦中研究得很好,但对其库容的遗传位点和因果基因知之甚少。因此,我们工作的主要目标是剖析大麦粒大小和重量的遗传结构。我们使用了一种多亲本群体,该群体是由 23 个不同的大麦自交系在双轮遗传交叉设计中杂交而成。在 HvDRR 群体中,我们评估了种子大小相关参数,如粒长、粒宽、粒面积和千粒重,该群体由 45 个重组自交系亚群体组成。我们发现所有种子大小特征都存在显著的基因型变异,并且在四个环境中观察到 84%或更高的表型遗传率。数量性状位点 (QTL) 检测结果表明,粒大小的遗传结构比以前报道的更复杂。此外,品种和地方品种都在粒大小 QTL 上贡献了积极的等位基因。使用全基因组变异调用数据为所有亲本自交系鉴定的候选基因表明,在谷物中存在重叠和潜在的新的粒大小调控因子。此外,我们的结果表明,在大麦中,库容是粒重的主要决定因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8094/9730814/4fc8bae3496a/erac369_fig1.jpg

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