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通过多位点序列分型法确定野生动物中多重耐药菌群体及复杂菌种的分子特征。

Determination of multidrug-resistant populations and molecular characterization of complex spp. in wild animals by multilocus sequence typing.

作者信息

de Sousa Alessandra Tammy Hayakawa Ito, Costa Marco Túlio Dos Santos, Cândido Stefhano Luis, Makino Herica, Morgado Thais Oliveira, Pavelegini Lucas Avelino Dandolini, Colodel Edson Moleta, Nakazato Luciano, Dutra Valéria

机构信息

Microbiology Laboratory of the Veterinary Hospital, Universidade Federal de Mato Grosso, Cuiabá, Mato Grosso, Brazil.

Center for Medicine and Research of Wild Animals, Universidade Federal de Mato Grosso, Cuiabá, Mato Grosso, Brazil.

出版信息

Vet World. 2022 Jul;15(7):1691-1698. doi: 10.14202/vetworld.2022.1691-1698. Epub 2022 Jul 19.

Abstract

BACKGROUND AND AIM

One of the most significant public health concerns is multidrug-resistant (MDR) microorganisms. spp. have been at the forefront of causing different types of infections such as bacteremia, urinary tract infections, pneumonia, enteritis, and sepsis in humans as well as animals. This study aimed to determine the genomic similarity between spp. isolated from wild animal samples and those described in the Institut Pasteur genomic database to verify the spread of resistant clones regionally in the state of Mato Grosso, and to compare the epidemiological data in different regions of Brazil and the world.

MATERIALS AND METHODS

Isolates from various sites of injury in wild animals were identified by sequencing the gene. Antimicrobial susceptibility testing was performed using the disk diffusion method to verify the resistance profile, and then, multilocus sequence typing was performed to verify the population structure and compare the isolates from other regions of Brazil and the world.

RESULTS

Twenty-three sequence types (STs) were observed; of these, 11 were new STs, as new alleles were detected. There was no predominant ST among the isolates. All isolates were MDR, with high rates of resistance to sulfonamides, ampicillin, amoxicillin, and nitrofurantoin and low resistance to meropenem, imipenem, and amikacin.

CONCLUSION

Improving our understanding of the population structure of spp. in wild animals may help determine the source of infection during outbreaks in humans or animals, as the One Health concept emphasizes the interlinks between humans, animals, and environmental health.

摘要

背景与目的

多重耐药(MDR)微生物是最重大的公共卫生问题之一。[微生物名称]在导致人类和动物的不同类型感染方面处于前沿位置,如菌血症、尿路感染、肺炎、肠炎和败血症。本研究旨在确定从野生动物样本中分离出的[微生物名称]与巴斯德研究所基因组数据库中描述的那些菌株之间的基因组相似性,以验证耐药克隆在马托格罗索州的区域传播情况,并比较巴西不同地区和世界其他地区的流行病学数据。

材料与方法

通过对[基因名称]进行测序,鉴定来自野生动物不同损伤部位的分离株。采用纸片扩散法进行抗菌药物敏感性测试以验证耐药谱,然后进行多位点序列分型以验证群体结构,并比较来自巴西其他地区和世界其他地区的分离株。

结果

观察到23种序列类型(STs);其中,11种是新的STs,因为检测到了新的等位基因。分离株中没有占主导地位的ST。所有分离株均为多重耐药,对磺胺类、氨苄西林、阿莫西林和呋喃妥因的耐药率较高,对美罗培南、亚胺培南和阿米卡星的耐药率较低。

结论

增进我们对野生动物中[微生物名称]群体结构的了解,可能有助于确定人类或动物疫情期间的感染源,因为“同一健康”概念强调了人类、动物和环境卫生之间的相互联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8ef/9394135/26ee824e8979/Vetworld-15-1691-g001.jpg

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