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鉴定药物、植物化学物质和类似天然化合物中的 CB1 配体:虚拟筛选和体外验证。

Identification of CB1 Ligands among Drugs, Phytochemicals and Natural-Like Compounds: Virtual Screening and In Vitro Verification.

机构信息

Department of Drug Chemistry, Faculty of Pharmacy, Medical University of Warsaw, Banacha 1, 02-097 Warsaw, Poland.

Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.

出版信息

ACS Chem Neurosci. 2022 Oct 19;13(20):2991-3007. doi: 10.1021/acschemneuro.2c00502. Epub 2022 Oct 5.

Abstract

Cannabinoid receptor type 1 (CB1) is an important modulator of many key physiological functions and thus a compelling molecular target. However, safe CB1 targeting is a non-trivial task. In recent years, there has been a surge of data indicating that drugs successfully used in the clinic for years (e.g. paracetamol) show CB1 activity. Moreover, there is a lot of promise in finding CB1 ligands in plants other than . In this study, we searched for possible CB1 activity among already existing drugs, their metabolites, phytochemicals, and natural-like molecules. We conducted two iterations of virtual screening, verifying the results with in vitro binding and functional assays. The in silico procedure consisted of a wide range of structure- and ligand-based methods, including docking, molecular dynamics, and quantitative structure-activity relationship (QSAR). As a result, we identified travoprost and ginkgetin as CB1 ligands, which provides a starting point for future research on the impact of their metabolites or preparations on the endocannabinoid system. Moreover, we found five natural-like compounds with submicromolar or low micromolar affinity to CB1, including one mixed partial agonist/antagonist viable for hit-to-lead phase. Finally, the computational procedure established in this work will be of use for future screening campaigns for novel CB1 ligands.

摘要

大麻素受体 1 型 (CB1) 是许多关键生理功能的重要调节剂,因此是一个极具吸引力的分子靶点。然而,安全地靶向 CB1 并非易事。近年来,有大量数据表明,多年来在临床上成功使用的药物(例如对乙酰氨基酚)显示出 CB1 活性。此外,在除大麻以外的植物中寻找 CB1 配体也有很大的前景。在这项研究中,我们在现有的药物、其代谢物、植物化学物质和类似天然的分子中寻找可能的 CB1 活性。我们进行了两轮虚拟筛选,通过体外结合和功能测定验证结果。计算机程序包括广泛的基于结构和基于配体的方法,包括对接、分子动力学和定量构效关系 (QSAR)。结果,我们确定了曲伏前列素和银杏素为 CB1 配体,这为研究其代谢物或制剂对内源性大麻素系统的影响提供了一个起点。此外,我们还发现了五种对 CB1 具有亚微摩尔或低微摩尔亲和力的类似天然化合物,其中一种混合部分激动剂/拮抗剂可用于从命中到先导的阶段。最后,本工作中建立的计算程序将可用于未来新型 CB1 配体的筛选活动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/957c/9585589/e3cafc794c44/cn2c00502_0002.jpg

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