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质量平衡成像:用于描述生物分子凝聚物生长动力学的相图分析。

Mass Balance Imaging: A Phase Portrait Analysis for Characterizing Growth Kinetics of Biomolecular Condensates.

机构信息

Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.

BIOTEC, TU Dresden, Dresden, Germany.

出版信息

Methods Mol Biol. 2023;2563:413-424. doi: 10.1007/978-1-0716-2663-4_21.

Abstract

Biomolecular condensation has emerged as a key organizing principle governing the formation of membraneless cellular assemblies. Revealing the mechanism of formation of biomolecular condensates requires the quantitative examination of their growth kinetics. Here, we introduce mass balance imaging (MBI) as a general method to study compositional growth dynamics based on fluorescent images of multicomponent clusters. MBI allows the visualization and measurement of composition-dependent growth rates of biomolecular condensates and other assemblies. We provide a computational pipeline and demonstrate the applicability of our method by investigating cortical assemblies containing N-WASP (WSP-1) and F-actin that appear during oocyte cortex activation in C. elegans. In general, the method can be broadly implemented to identify interactions that underlie growth kinetics of multicomponent assemblies in vivo and in vitro.

摘要

生物分子凝聚已成为控制无膜细胞组装形成的关键组织原则。揭示生物分子凝聚的形成机制需要定量研究它们的生长动力学。在这里,我们引入质量平衡成像 (MBI) 作为一种基于多组分聚集体荧光图像研究组成生长动力学的通用方法。MBI 允许可视化和测量生物分子凝聚物和其他组装体的组成依赖性生长速率。我们提供了一个计算管道,并通过研究秀丽隐杆线虫卵母细胞皮层激活过程中出现的包含 N-WASP (WSP-1) 和 F-肌动蛋白的皮层组装体来展示我们方法的适用性。一般来说,该方法可以广泛应用于识别体内和体外多组分组装体生长动力学的基础相互作用。

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