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与膀胱癌免疫微环境及预后相关的代谢相关特征和核心基因

Metabolic-associated signature and hub genes associated with immune microenvironment and prognosis in bladder cancer.

作者信息

Guo Yadong, Zheng Zongtai, Mao Shiyu, Yang Fuhan, Wang Ruiliang, Wang Hong, Liu Ji, Li Cheng, Wang Qinwan, Zhang Wentao, Yao Xudong, Liu Shenghua

机构信息

Department of Urology, Shanghai Tenth People's Hospital, School of Medicine, Tongji University, Shanghai, China.

Institute of Urinary Oncology, Tongji University, Shanghai, China.

出版信息

Mol Carcinog. 2023 Feb;62(2):185-199. doi: 10.1002/mc.23475. Epub 2022 Oct 17.

DOI:10.1002/mc.23475
PMID:36250643
Abstract

The relationship between metabolism and immune microenvironment remains to be studied in bladder cancer (BCa). We aimed to construct a metabolic-associated signature for prognostic prediction and investigate its relationship with the immune microenvironment in BCa. The RNA expression of metabolism associated genes was obtained from a combined data set including The Cancer Genome Atlas, GSE48075, and GSE13507 to divide BCa patients into different clusters. A metabolic-associated signature was constructed using the differentially expressed genes between clusters in the combined data set and validated in the IMvigor210 trial and our center. The composition of tumor-infiltrating immune cells (TIICs) was evaluated using the single-sample Gene Set Variation Analysis. BCa patients in Cluster A or high-risk level were associated with advanced clinicopathological features and poor survival outcomes. The percentage of high-risk patients was significantly lower in patients responding to anti-PD-L1 treatment. Compared with low-risk patients, the IC50 values of cisplatin and gemcitabine were significantly lower in high-risk patients. Thiosulfate transferase (TST) and S100A16 were significantly associated with clinicopathological features and prognosis. Downregulation of TST promoted BCa cell invasion, migration, and epithelial-to-mesenchymal transition, which are inhibited by downregulation of S100A16. CD8 + T cells, neutrophils, and dendritic cells had higher infiltration in the TST low-level and the S100A16 high-level. Furthermore, loss of function TST and S100A16 significantly affected the expression of PD-L1 and CD47. The metabolic-associated signature can stratify BCa patients into distinct risk levels with different immunotherapeutic susceptibility and survival outcomes. Metabolism disorder promoted the dysregulation of immune microenvironment, thus contributing to immunosuppression.

摘要

代谢与免疫微环境之间的关系在膀胱癌(BCa)中仍有待研究。我们旨在构建一种与代谢相关的特征用于预后预测,并研究其与BCa免疫微环境的关系。从包括癌症基因组图谱、GSE48075和GSE13507在内的组合数据集中获取代谢相关基因的RNA表达,以将BCa患者分为不同的簇。使用组合数据集中簇间差异表达基因构建了一种与代谢相关的特征,并在IMvigor210试验和我们中心进行了验证。使用单样本基因集变异分析评估肿瘤浸润免疫细胞(TIICs)的组成。A簇或高危水平的BCa患者与晚期临床病理特征和不良生存结果相关。抗PD-L1治疗有反应的患者中高危患者的比例显著降低。与低危患者相比,高危患者顺铂和吉西他滨的IC50值显著更低。硫代硫酸盐转移酶(TST)和S100A16与临床病理特征和预后显著相关。TST的下调促进了BCa细胞的侵袭、迁移和上皮-间质转化,而S100A16的下调则抑制了这些过程。CD8 + T细胞、中性粒细胞和树突状细胞在TST低水平和S100A16高水平时浸润更高。此外,功能缺失的TST和S100A16显著影响PD-L1和CD47的表达。与代谢相关的特征可将BCa患者分为具有不同免疫治疗敏感性和生存结果的不同风险水平。代谢紊乱促进了免疫微环境的失调,从而导致免疫抑制。

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