Departamento de Microbiología y Genética, Campus Miguel de Unamuno, University of Salamanca, 37007 Salamanca, Spain.
Department of Physiology, Anatomy and Microbiology, La Trobe University, Melbourne, Victoria, Australia.
Int J Syst Evol Microbiol. 2022 Oct;72(10). doi: 10.1099/ijsem.0.005547.
The taxonomic status of two strains, designated BEN371 and CON9, isolated from stable foams on activated sludge plants was the subject of a polyphasic study which also included the type strains of species and three authenticated strains recovered from such foams. Phylogenetic analyses of 16S rRNA gene sequences showed that these isolates formed a compact cluster suggesting a well-supported lineage together with a second branch containing the strains. A phylogenomic tree based on sequences of 92 core genes extracted from whole genome sequences of the isolates, the strains and type strains confirmed the assignment of the isolates and the strains to separate but closely associated lineages. Average nucleotide index (ANI) and digital DNA-DNA hybridisation (dDDH) similarities showed that BEN371 and CON9 belonged to the same species and had chemotaxonomic and morphological features consistent with their assignment to the genus . The isolates and the strains were distinguished using a range of phenotypic features and by low ANI and dDDH values of 84.2 and 27.0 %, respectively. These data supplemented with associated genome characteristics show that BEN371 and CON9 represent a novel species of the genus . The name proposed for members of this taxon is sp. nov. with isolate CON9 (=DSM 43602=JCM 35249) as the type strain.
两株菌,分别命名为 BEN371 和 CON9,从活性污泥装置的稳定泡沫中分离得到,它们的分类地位是一项多相研究的主题,该研究还包括 种的模式菌株和从这些泡沫中回收的三株经证实的 菌株。16S rRNA 基因序列的系统发育分析表明,这些分离物形成了一个紧密的聚类,表明与包含 菌株的第二个分支一起形成了一个支持良好的谱系。基于从分离株、 菌株和 模式株的全基因组序列中提取的 92 个核心基因序列构建的系统发育树,证实了分离株和 菌株分别属于两个独立但密切相关的谱系。平均核苷酸指数 (ANI) 和数字 DNA-DNA 杂交 (dDDH) 相似性表明,BEN371 和 CON9 属于同一个种,具有与它们归属于 属的化学分类和形态特征一致的特征。这些分离株和 菌株通过一系列表型特征以及较低的 ANI 和 dDDH 值(分别为 84.2%和 27.0%)来区分。这些数据加上相关的基因组特征表明,BEN371 和 CON9 代表了 属的一个新种。该分类群的成员被提议命名为 sp. nov.,其中 CON9 分离株(=DSM 43602=JCM 35249)为模式菌株。