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细胞DNA和合成DNA中独特的聚(dA)·聚(dT)B'构象

Unique poly(dA).poly(dT) B'-conformation in cellular and synthetic DNAs.

作者信息

Diekmann S, Zarling D A

出版信息

Nucleic Acids Res. 1987 Aug 11;15(15):6063-74. doi: 10.1093/nar/15.15.6063.

DOI:10.1093/nar/15.15.6063
PMID:3627979
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC306068/
Abstract

Poly(dA).poly(dT), but not B-form DNA, is specifically recognized by experimentally induced anti-kinetoplast or anti-poly(dA).poly(dT) immunoglobulins. Antibody binding is completely competed by poly(dA).poly(dT) and poly(dA).poly(dU) but not by other single- or double-stranded DNA sequences in a right-handed B-form. Antibody interaction with poly(dA).poly(dT) depends on immunoglobulin concentration, incubation time and temperature, and is sensitive to elevated ionic strengths. Similar conformations, for example, (dA)4-6 X (dT)4-6, in the kinetoplast DNA of the parasite Leishmania tarentolae are also immunogenic and induce specific anti-poly(dA).poly(dT) antibodies. These antibody probes specifically recognize nuclear and kinetoplast DNA in fixed flagellated kinetoplastid cells as evidenced by immunofluorescence microscopy. Anti-poly(dA).poly(dT) immunofluorescence is DNase-sensitive and competed by poly(dA).poly(dT), but not other classical double-stranded B-DNAs. Thus, these unique cellular B'-DNA helices are immunogenic and structurally similar to synthetic poly(dA).poly(dT) helices in solution.

摘要

聚(dA)·聚(dT),而非B型DNA,能被实验诱导产生的抗动质体或抗聚(dA)·聚(dT)免疫球蛋白特异性识别。抗体结合能被聚(dA)·聚(dT)和聚(dA)·聚(dU)完全竞争,但不能被右手B型的其他单链或双链DNA序列竞争。抗体与聚(dA)·聚(dT)的相互作用取决于免疫球蛋白浓度、孵育时间和温度,并且对离子强度升高敏感。寄生虫塔氏利什曼原虫动质体DNA中类似的构象,如(dA)4 - 6×(dT)4 - 6,也具有免疫原性,并能诱导产生特异性抗聚(dA)·聚(dT)抗体。通过免疫荧光显微镜观察证明,这些抗体探针能特异性识别固定的有鞭毛动基体目细胞中的核DNA和动质体DNA。抗聚(dA)·聚(dT)免疫荧光对DNA酶敏感,并能被聚(dA)·聚(dT)竞争,但不能被其他经典的双链B - DNA竞争。因此,这些独特的细胞B' - DNA螺旋具有免疫原性,并且在结构上与溶液中的合成聚(dA)·聚(dT)螺旋相似。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d791/306068/3df9cc4f96d8/nar00259-0167-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d791/306068/b7285538c661/nar00259-0162-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d791/306068/3df9cc4f96d8/nar00259-0167-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d791/306068/b7285538c661/nar00259-0162-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d791/306068/3df9cc4f96d8/nar00259-0167-a.jpg

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Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.核小体不会在双链RNA上形成,也不会在重组DNA中的聚(dA)·聚(dT)区段上形成。
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