Yang Mingyi, Luo Pan, Zhang Feng, Xu Ke, Feng Ruoyang, Xu Peng
Department of Joint Surgery, Honghui Hospital, Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Key Laboratory of Trace Elements and Endemic Diseases, National Health and Family Planning Commission, School of Public Health, Health Science Center, Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Front Cardiovasc Med. 2022 Nov 7;9:1025918. doi: 10.3389/fcvm.2022.1025918. eCollection 2022.
Although previous studies have shown that gut microbiota may be involved in the occurrence of deep venous thrombosis (DVT), the specific link between the two remains unclear. The present study aimed to explore this question from a genetic perspective.
Genome-wide association study (GWAS) summary data of DVT were obtained from the UK Biobank ( = 9,059). GWAS summary data of the gut microbiota were obtained from the Flemish Gut Flora Project ( = 2,223) and two German cohorts (FoCus, = 950; PopGen, = 717). All the participants were of European ancestry. Linkage disequilibrium score (LDSC) regression has great potential for analyzing the heritability of disease or character traits. LDSC regression was used to analyze the genetic correlation between DVT and the gut microbiota based on the GWAS summary data obtained from previous studies. Mendelian randomization (MR) was used to analyze the genetic causal relationship between DVT and the gut microbiota. We used the random effects inverse variance weighted, MR Egger, weighted median, simple mode, and weighted mode to perform MR analysis. We performed a sensitivity analysis of the MR analysis results by examining heterogeneity and horizontal pleiotropy.
Linkage disequilibrium score analysis showed that Streptococcaceae (correlation coefficient = -0.542, SE = 0.237, = 0.022), Dialister (correlation coefficient = -0.623, SE = 0.316, = 0.049), Streptococcus (correlation coefficient = -0.576, SE = 0.264, = 0.029), and Lactobacillales (correlation coefficient = -0.484, SE = 0.237, = 0.042) had suggestive genetic correlation with DVT. In addition, the MR analysis showed that Streptococcaceae had a positive genetic causal relationship with DVT ( = 0.027, OR = 1.005). There was no heterogeneity or horizontal pleiotropy in the MR analysis ( > 0.05).
In this study, four gut microbes (Streptococcaceae, Dialister Streptococcus, Lactobacillales) had suggestive genetic correlations with DVT, and Streptococcaceae had a positive causal relationship with DVT. Our findings provide a new research direction for the further study of and prevention of DVT.
尽管先前的研究表明肠道微生物群可能与深静脉血栓形成(DVT)的发生有关,但两者之间的具体联系仍不清楚。本研究旨在从遗传学角度探讨这个问题。
从英国生物银行获得DVT的全基因组关联研究(GWAS)汇总数据(n = 9,059)。从佛兰芒肠道菌群项目(n = 2,223)和两个德国队列(FoCus,n = 950;PopGen,n = 717)获得肠道微生物群的GWAS汇总数据。所有参与者均为欧洲血统。连锁不平衡评分(LDSC)回归在分析疾病或性状特征的遗传力方面具有很大潜力。基于先前研究获得的GWAS汇总数据,使用LDSC回归分析DVT与肠道微生物群之间的遗传相关性。采用孟德尔随机化(MR)分析DVT与肠道微生物群之间的遗传因果关系。我们使用随机效应逆方差加权、MR-Egger、加权中位数、简单模式和加权模式进行MR分析。通过检查异质性和水平多效性对MR分析结果进行敏感性分析。
连锁不平衡评分分析显示,链球菌科(相关系数 = -0.542,标准误 = 0.237,P = 0.022)、戴阿利斯特菌属(相关系数 = -0.623,标准误 = 0.316,P = 0.049)、链球菌属(相关系数 = -0.576,标准误 = 0.264,P = 0.029)和乳杆菌目(相关系数 = -0.484,标准误 = 0.237,P = 0.042)与DVT存在潜在的遗传相关性。此外,MR分析显示链球菌科与DVT存在正向遗传因果关系(P = 0.027,比值比 = 1.005)。MR分析中不存在异质性或水平多效性(P > 0.05)。
在本研究中,四种肠道微生物(链球菌科、戴阿利斯特菌属、链球菌属、乳杆菌目)与DVT存在潜在的遗传相关性,且链球菌科与DVT存在正向因果关系。我们的研究结果为进一步研究和预防DVT提供了新的研究方向。