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本文引用的文献

1
Practical considerations for the measurement of near-surface electrostatics based on solvent paramagnetic relaxation enhancements.基于溶剂顺磁弛豫增强的近表面静电测量的实际考量。
J Magn Reson. 2023 Apr;349:107400. doi: 10.1016/j.jmr.2023.107400. Epub 2023 Feb 9.
2
Negatively charged, intrinsically disordered regions can accelerate target search by DNA-binding proteins.带负电荷、固有无序的区域可以加速 DNA 结合蛋白的靶标搜索。
Nucleic Acids Res. 2023 Jun 9;51(10):4701-4712. doi: 10.1093/nar/gkad045.
3
Functional partitioning of transcriptional regulators by patterned charge blocks.通过图案化的电荷块对转录调控因子进行功能分区。
Cell. 2023 Jan 19;186(2):327-345.e28. doi: 10.1016/j.cell.2022.12.013. Epub 2023 Jan 4.
4
Solvent paramagnetic relaxation enhancement as a versatile method for studying structure and dynamics of biomolecular systems.溶剂顺磁弛豫增强作为研究生物分子系统结构与动力学的通用方法。
Prog Nucl Magn Reson Spectrosc. 2022 Oct-Dec;132-133:113-139. doi: 10.1016/j.pnmrs.2022.09.001. Epub 2022 Sep 21.
5
Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties.表面静电决定 RNA 结合蛋白 CAPRIN1 凝聚物的浓度和流体动力学性质。
J Biol Chem. 2023 Jan;299(1):102776. doi: 10.1016/j.jbc.2022.102776. Epub 2022 Dec 7.
6
β-Lactamases Evolve against Antibiotics by Acquiring Large Active-Site Electric Fields.β-内酰胺酶通过获得大型活性位点电场来对抗抗生素而进化。
J Am Chem Soc. 2022 Dec 7;144(48):22289-22294. doi: 10.1021/jacs.2c10791. Epub 2022 Nov 18.
7
Reliable and Accurate Prediction of Single-Residue p Values through Free Energy Perturbation Calculations.通过自由能微扰计算可靠且准确地预测单残基 p 值。
J Chem Theory Comput. 2022 Dec 13;18(12):7193-7204. doi: 10.1021/acs.jctc.2c00954. Epub 2022 Nov 16.
8
Theory and Applications of Nitroxide-based Paramagnetic Cosolutes for Probing Intermolecular and Electrostatic Interactions on Protein Surfaces.基于氮氧自由基的顺磁共溶剂在探测蛋白质表面分子间和静电相互作用中的理论和应用。
J Am Chem Soc. 2022 Nov 23;144(46):21371-21388. doi: 10.1021/jacs.2c10035. Epub 2022 Nov 8.
9
Protein Electric Fields Enable Faster and Longer-Lasting Covalent Inhibition of β-Lactamases.蛋白电场能够实现更快、更持久的β-内酰胺酶共价抑制。
J Am Chem Soc. 2022 Nov 16;144(45):20947-20954. doi: 10.1021/jacs.2c09876. Epub 2022 Nov 2.
10
Measuring Local Electrostatic Potentials Around Nucleic Acids by Paramagnetic NMR Spectroscopy.通过顺磁 NMR 光谱法测量核酸周围的局部静电势。
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通过实验直接测量生物分子静电。

Direct measurements of biomolecular electrostatics through experiments.

机构信息

Department of Biochemistry & Molecular Biology, Sealy Center for Structural Biology & Molecular Biophysics, University of Texas Medical Branch, Galveston, TX 77555, USA.

Department of Biochemistry & Molecular Biology, Sealy Center for Structural Biology & Molecular Biophysics, University of Texas Medical Branch, Galveston, TX 77555, USA.

出版信息

Curr Opin Struct Biol. 2023 Oct;82:102680. doi: 10.1016/j.sbi.2023.102680. Epub 2023 Aug 11.

DOI:10.1016/j.sbi.2023.102680
PMID:37573815
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10947535/
Abstract

Biomolecular electrostatics has been a subject of computational investigations based on 3D structures. This situation is changing because emerging experimental tools allow us to quantitatively investigate biomolecular electrostatics without any use of structure information. Now, electrostatic potentials around biomolecules can directly be measured for many residues simultaneously by nuclear magnetic resonance (NMR) spectroscopy. This NMR method can be used to study electrostatic aspects of various processes, including macromolecular association and liquid-liquid phase separation. Applications to structurally flexible biomolecules such as intrinsically disordered proteins are particularly useful. The new tools also facilitate examination of theoretical models and methods for biomolecular electrostatics.

摘要

生物分子静电学一直是基于 3D 结构的计算研究课题。这种情况正在发生变化,因为新兴的实验工具使我们能够在不使用任何结构信息的情况下定量研究生物分子静电。现在,通过核磁共振(NMR)光谱可以直接同时测量许多残基周围的分子静电势。这种 NMR 方法可用于研究包括大分子缔合和液-液相分离在内的各种过程中的静电方面。它在结构灵活的生物分子(如天然无序蛋白)中的应用尤其有用。这些新工具也有助于检验生物分子静电的理论模型和方法。