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酵母 MutSβ 功能缺失突变体的自发突变率。

The rate of spontaneous mutations in yeast deficient for MutSβ function.

机构信息

Center for Genomics and Systems Biology, New York University, New York 10003, USA.

Department of Biology, New York University, New York 10003, USA.

出版信息

G3 (Bethesda). 2023 Mar 9;13(3). doi: 10.1093/g3journal/jkac330.

DOI:10.1093/g3journal/jkac330
PMID:36529906
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9997558/
Abstract

Mutations in simple sequence repeat loci underlie many inherited disorders in humans, and are increasingly recognized as important determinants of natural phenotypic variation. In eukaryotes, mutations in these sequences are primarily repaired by the MutSβ mismatch repair complex. To better understand the role of this complex in mismatch repair and the determinants of simple sequence repeat mutation predisposition, we performed mutation accumulation in yeast strains with abrogated MutSβ function. We demonstrate that mutations in simple sequence repeat loci in the absence of mismatch repair are primarily deletions. We also show that mutations accumulate at drastically different rates in short (<8 bp) and longer repeat loci. These data lend support to a model in which the mismatch repair complex is responsible for repair primarily in longer simple sequence repeats.

摘要

简单重复序列位点的突变是人类许多遗传性疾病的基础,并且越来越被认为是自然表型变异的重要决定因素。在真核生物中,这些序列的突变主要由 MutSβ 错配修复复合物修复。为了更好地理解该复合物在错配修复中的作用和简单重复序列突变易感性的决定因素,我们在缺失 MutSβ 功能的酵母菌株中进行了突变积累实验。我们证明,在没有错配修复的情况下,简单重复序列位点的突变主要是缺失。我们还表明,在较短(<8bp)和较长重复序列位点,突变以截然不同的速率积累。这些数据支持这样一种模型,即错配修复复合物主要负责修复较长的简单重复序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/75bf1303ab90/jkac330f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/4fb7a1142164/jkac330f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/285eecfa3604/jkac330f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/75bf1303ab90/jkac330f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/4fb7a1142164/jkac330f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/285eecfa3604/jkac330f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4abf/9997558/75bf1303ab90/jkac330f3.jpg

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Genetics. 2022 Jul 30;221(4). doi: 10.1093/genetics/iyac092.
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Multiplexing mutation rate assessment: determining pathogenicity of Msh2 variants in Saccharomyces cerevisiae.多重突变率评估:在酿酒酵母中确定 Msh2 变体的致病性。
Genetics. 2021 Jun 24;218(2). doi: 10.1093/genetics/iyab058.
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MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability.
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Genomics Proteomics Bioinformatics. 2020 Feb;18(1):65-71. doi: 10.1016/j.gpb.2020.02.001. Epub 2020 Mar 12.
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The impact of short tandem repeat variation on gene expression.短串联重复序列变异对基因表达的影响。
Nat Genet. 2019 Nov;51(11):1652-1659. doi: 10.1038/s41588-019-0521-9. Epub 2019 Nov 1.
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