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来自中国长庆油田的耐高温耐氯化钠菌株铁(III)还原的生长及基于基因组的见解

Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant from Changqing oilfield of China.

作者信息

Yang Jiani, Zhao Dan, Liu Tao, Zhang Shuang, Wang Weidong, Yan Lei, Gu Ji-Dong

机构信息

Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, China.

Key Laboratory of Low-Carbon Green Agriculture in Northeastern China, Ministry of Agriculture and Rural Affairs, Daqing, China.

出版信息

Front Microbiol. 2022 Dec 5;13:1028030. doi: 10.3389/fmicb.2022.1028030. eCollection 2022.

Abstract

INTRODUCTION

A facultative anaerobe bacterium CQ-Y1 was isolated from the wastewater of Changqing oilfield in Shaanxi Province of China. is the important dissimilatory metal-reducing bacteria. It exhibited a well potential application in biodegradation and bioremediation.

METHODS

Genome sequencing, assembling and functional annotation were conducted to explore the genome information of CQ-Y1. The effect of temperatures and NaCl concentrations on the CQ-Y1 growth and Fe(III) reduction were investigated by UV visible spectrophotometry, SEM and XRD.

RESULTS

Genomic analysis revealed its complete genome was a circular chromosome of 4,710,887 bp with a GC content of 46.50% and 4,110 CDSs genes, 86 tRNAs and 26 rRNAs. It contains genes encoding for Na/H antiporter, K/Cl transporter, heat shock protein associated with NaCl and high-temperature resistance. The presence of genes related to flavin, Cytochrome , siderophore, and other related proteins supported Fe(III) reduction. In addition, CQ-Y1 could survive at 10% NaCl (w/v) and 45°C, and temperature showed more pronounced effects than NaCl concentration on the bacterial growth. The maximum Fe(III) reduction ratio of CQ-Y1 reached 70.1% at 30°C without NaCl, and the reduction reaction remained active at 40°C with 3% NaCl (w/v). NaCl concentration was more effective than temperature on microbial Fe(III) reduction. And the reduction products under high temperature and high NaCl conditions were characterized as Fe(PO), FeCl and Fe(OH).

DISCUSSION

Accordingly, a Fe(III) reduction mechanism of CQ-Y1 mediated by Cytochrome and flavin was hypothesised. These findings could provide information for a better understanding of the origin and evolution of genomic and metabolic diversity of .

摘要

引言

从中国陕西省长庆油田的废水中分离出一种兼性厌氧细菌CQ-Y1。它是重要的异化金属还原菌,在生物降解和生物修复方面具有良好的应用潜力。

方法

进行基因组测序、组装和功能注释以探索CQ-Y1的基因组信息。通过紫外可见分光光度法、扫描电子显微镜和X射线衍射研究温度和氯化钠浓度对CQ-Y1生长及铁(III)还原的影响。

结果

基因组分析表明其完整基因组是一条4710887 bp的环状染色体,GC含量为46.50%,有4110个编码序列基因、86个tRNA和26个rRNA。它包含编码钠/氢反向转运蛋白、钾/氯转运蛋白、与氯化钠和耐高温相关的热休克蛋白的基因。与黄素、细胞色素、铁载体及其他相关蛋白有关的基因的存在支持了铁(III)的还原。此外,CQ-Y1能在10%(w/v)氯化钠和45°C条件下存活,温度对细菌生长的影响比氯化钠浓度更显著。在无氯化钠条件下,CQ-Y1在30°C时铁(III)的最大还原率达到70.1%,在3%(w/v)氯化钠条件下40°C时还原反应仍具有活性。氯化钠浓度对微生物铁(III)还原的影响比温度更有效。高温和高氯化钠条件下的还原产物被表征为磷酸铁、氯化铁和氢氧化铁。

讨论

据此,推测了由细胞色素和黄素介导的CQ-Y1的铁(III)还原机制。这些发现可为更好地理解[细菌名称未明确给出]基因组和代谢多样性的起源及进化提供信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c93/9760863/805e03e08937/fmicb-13-1028030-g001.jpg

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