Yang Jiani, Zhao Dan, Liu Tao, Zhang Shuang, Wang Weidong, Yan Lei, Gu Ji-Dong
Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, China.
Key Laboratory of Low-Carbon Green Agriculture in Northeastern China, Ministry of Agriculture and Rural Affairs, Daqing, China.
Front Microbiol. 2022 Dec 5;13:1028030. doi: 10.3389/fmicb.2022.1028030. eCollection 2022.
A facultative anaerobe bacterium CQ-Y1 was isolated from the wastewater of Changqing oilfield in Shaanxi Province of China. is the important dissimilatory metal-reducing bacteria. It exhibited a well potential application in biodegradation and bioremediation.
Genome sequencing, assembling and functional annotation were conducted to explore the genome information of CQ-Y1. The effect of temperatures and NaCl concentrations on the CQ-Y1 growth and Fe(III) reduction were investigated by UV visible spectrophotometry, SEM and XRD.
Genomic analysis revealed its complete genome was a circular chromosome of 4,710,887 bp with a GC content of 46.50% and 4,110 CDSs genes, 86 tRNAs and 26 rRNAs. It contains genes encoding for Na/H antiporter, K/Cl transporter, heat shock protein associated with NaCl and high-temperature resistance. The presence of genes related to flavin, Cytochrome , siderophore, and other related proteins supported Fe(III) reduction. In addition, CQ-Y1 could survive at 10% NaCl (w/v) and 45°C, and temperature showed more pronounced effects than NaCl concentration on the bacterial growth. The maximum Fe(III) reduction ratio of CQ-Y1 reached 70.1% at 30°C without NaCl, and the reduction reaction remained active at 40°C with 3% NaCl (w/v). NaCl concentration was more effective than temperature on microbial Fe(III) reduction. And the reduction products under high temperature and high NaCl conditions were characterized as Fe(PO), FeCl and Fe(OH).
Accordingly, a Fe(III) reduction mechanism of CQ-Y1 mediated by Cytochrome and flavin was hypothesised. These findings could provide information for a better understanding of the origin and evolution of genomic and metabolic diversity of .
从中国陕西省长庆油田的废水中分离出一种兼性厌氧细菌CQ-Y1。它是重要的异化金属还原菌,在生物降解和生物修复方面具有良好的应用潜力。
进行基因组测序、组装和功能注释以探索CQ-Y1的基因组信息。通过紫外可见分光光度法、扫描电子显微镜和X射线衍射研究温度和氯化钠浓度对CQ-Y1生长及铁(III)还原的影响。
基因组分析表明其完整基因组是一条4710887 bp的环状染色体,GC含量为46.50%,有4110个编码序列基因、86个tRNA和26个rRNA。它包含编码钠/氢反向转运蛋白、钾/氯转运蛋白、与氯化钠和耐高温相关的热休克蛋白的基因。与黄素、细胞色素、铁载体及其他相关蛋白有关的基因的存在支持了铁(III)的还原。此外,CQ-Y1能在10%(w/v)氯化钠和45°C条件下存活,温度对细菌生长的影响比氯化钠浓度更显著。在无氯化钠条件下,CQ-Y1在30°C时铁(III)的最大还原率达到70.1%,在3%(w/v)氯化钠条件下40°C时还原反应仍具有活性。氯化钠浓度对微生物铁(III)还原的影响比温度更有效。高温和高氯化钠条件下的还原产物被表征为磷酸铁、氯化铁和氢氧化铁。
据此,推测了由细胞色素和黄素介导的CQ-Y1的铁(III)还原机制。这些发现可为更好地理解[细菌名称未明确给出]基因组和代谢多样性的起源及进化提供信息。