Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO 80523, USA.
Department of Statistics, Colorado State University, Fort Collins, CO 80523, USA.
Viruses. 2022 Dec 30;15(1):106. doi: 10.3390/v15010106.
During early phases of the SARS-CoV-2 epidemic, many research laboratories repurposed their efforts towards developing diagnostic testing that could aid public health surveillance while commercial and public diagnostic laboratories developed capacity and validated large scale testing methods. Simultaneously, the rush to produce point-of-care and diagnostic facility testing resulted in FDA Emergency Use Authorization with scarce and poorly validated clinical samples. Here, we review serologic test results from 186 serum samples collected in early phases of the pandemic (May 2020) from skilled nursing facilities tested with six laboratory-based and two commercially available assays. Serum neutralization titers were used to set cut-off values using positive to negative ratio (P/N) analysis to account for batch effects. We found that laboratory-based receptor binding domain (RBD) binding assays had equivalent or superior sensitivity and specificity compared to commercially available tests. We also determined seroconversion rate and compared with qPCR outcomes. Our work suggests that research laboratory assays can contribute reliable surveillance information and should be considered important adjuncts to commercial laboratory testing facilities during early phases of disease outbreaks.
在 SARS-CoV-2 疫情的早期阶段,许多研究实验室将其工作重点转向开发诊断检测方法,以帮助公共卫生监测,同时商业和公共诊断实验室也在不断发展和验证大规模检测方法。与此同时,人们急于生产即时检测和诊断设施检测,导致 FDA 紧急使用授权(EUA)仅使用了稀缺且验证不足的临床样本。在这里,我们回顾了在大流行早期(2020 年 5 月)从熟练护理设施中收集的 186 份血清样本的血清学检测结果,这些样本使用六种基于实验室的和两种商业上可用的检测方法进行了测试。我们使用血清中和滴度通过正负比(P/N)分析来设置截止值,以解释批次效应。我们发现,基于实验室的受体结合域(RBD)结合检测法与商业上可用的检测法具有同等或更高的灵敏度和特异性。我们还确定了血清转化率,并与 qPCR 结果进行了比较。我们的工作表明,研究实验室的检测方法可以提供可靠的监测信息,在疾病爆发的早期阶段,应被视为商业实验室检测设施的重要补充。