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(帕金森氏,以F.A.佐恩的名字命名)福斯伯格(桑科)的完整质体基因组序列。

The complete plastome sequence of (Parkinson ex F.A. Zorn) Fosberg, (Moraceae).

作者信息

Wei Lv, Wang Hong-Xin, Chen Da-Juan, Ke Xiu-Rong, Zhu Zhi-Xin, Wang Hua-Feng

机构信息

College of Tropical Crops, Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan University, Haikou, China.

Zhai Mingguo Academician Work Station, Sanya University, Sanya, China.

出版信息

Mitochondrial DNA B Resour. 2023 Jan 16;8(1):154-156. doi: 10.1080/23802359.2022.2163595. eCollection 2023.

Abstract

(Parkinson ex F.A. Zorn) Fosberg is native to the Pacific Islands, India, and the Philippines. It is also cultivated in Taiwan and Hainan. The complete plastome of the species was assembled and annotated in this study. The circular genome was 160,184 bp in size, presenting a typical quadripartite structure including two inverted repeats (IRs) of 25,734 bp, a large single-copy (LSC) of 88,791 bp, and a small single-copy (SSC) of 19,925 bp. The genome contained 132 genes, including 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The total G/C content of complete plastome was 36.0%, with the corresponding values of the LSC, SSC, and IR being 33.7%, 28.8%, and 42.7%, respectively. The complete plastome sequence of (Parkinson ex F.A. Zorn) Fosberg will make contributions to the conservation genetics of this species as well as to phylogenetic studies of Moraceae.

摘要

(帕金森氏,原载于F.A.佐恩著作)福斯伯格氏植物原产于太平洋岛屿、印度和菲律宾。它也在台湾和海南有种植。本研究对该物种的完整质体基因组进行了组装和注释。环状基因组大小为160,184碱基对,呈现典型的四分体结构,包括两个25,734碱基对的反向重复序列(IRs)、一个88,791碱基对的大单拷贝(LSC)和一个19,925碱基对的小单拷贝(SSC)。该基因组包含132个基因,包括87个蛋白质编码基因、37个tRNA基因和8个rRNA基因。完整质体基因组的总G/C含量为36.0%,LSC、SSC和IR的相应值分别为33.7%、28.8%和42.7%。福斯伯格氏(帕金森氏,原载于F.A.佐恩著作)的完整质体基因组序列将为该物种的保护遗传学以及桑科的系统发育研究做出贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/9848291/dc2d3e2630e3/TMDN_A_2163595_F0001_B.jpg

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