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一种基于高维协变量稳定得分检验的生存树。

A survival tree based on stabilized score tests for high-dimensional covariates.

作者信息

Emura Takeshi, Hsu Wei-Chern, Chou Wen-Chi

机构信息

Biostatistics Center, Kurume University, Kurume, Japan.

Graduate Institute of Statistics, National Central University, Taoyuan, Taiwan.

出版信息

J Appl Stat. 2021 Oct 21;50(2):264-290. doi: 10.1080/02664763.2021.1990224. eCollection 2023.

DOI:10.1080/02664763.2021.1990224
PMID:36698545
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9870022/
Abstract

A survival tree can classify subjects into different survival prognostic groups. However, when data contains high-dimensional covariates, the two popular classification trees exhibit fatal drawbacks. The logrank tree is unstable and tends to have false nodes; the conditional inference tree is difficult to interpret the adjusted -value for high-dimensional tests. Motivated by these problems, we propose a new survival tree based on the stabilized score tests. We propose a novel matrix-based algorithm in order to tests a number of nodes simultaneously via stabilized score tests. We propose a recursive partitioning algorithm to construct a survival tree and develop our original R package (https://cran.r-project.org/package=uni.survival.tree) for implementation. Simulations are performed to demonstrate the superiority of the proposed method over the existing methods. The lung cancer data analysis demonstrates the usefulness of the proposed method.

摘要

生存树可以将研究对象分类到不同的生存预后组中。然而,当数据包含高维协变量时,两种常用的分类树存在致命缺陷。对数秩树不稳定,容易出现虚假节点;条件推断树难以解释高维检验的调整p值。受这些问题的启发,我们提出了一种基于稳定得分检验的新生存树。我们提出了一种新颖的基于矩阵的算法,以便通过稳定得分检验同时检验多个节点。我们提出了一种递归划分算法来构建生存树,并开发了我们自己的R原始包(https://cran.r-project.org/package=uni.survival.tree)用于实现。进行模拟以证明所提出的方法优于现有方法。肺癌数据分析证明了所提出方法的实用性。